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Fusion flag
Keiran Raine edited this page Sep 8, 2016
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1 revision
This table describes the meaning of the fusion flag values:
| ID_FUSION_FLAG | FUSION_FLAG |
|---|---|
| 910 | In frame fusion gene, 2 different genes, broken in coding exons. Same orientation. Reading frame preserved |
| 900 | In frame fusion gene, 2 different genes, broken in coding introns. Same orientation. Reading frame preserved |
| 890 | In frame fusion gene, same gene, broken in 2 different coding exons. Same orientation. Reading frame preserved |
| 880 | In frame fusion gene, same gene, broken in 2 different coding introns. Same orientation. Reading frame preserved |
| 860 | 5UTR to 5UTR fusion, different genes. Same orientation |
| 840 | 5UTR to 5UTR fusion, same gene. Same orientation |
| 820 | 5UTR to coding fusion, 2 different genes. 1 break in 5UTR, 1 break in coding region. Same orientation. Ambiguous reading frame |
| 800 | 5UTR to coding fusion, same gene. 1 break in 5UTR, 1 break in coding region. Same orientation. Ambiguous reading frame |
| 780 | Fusion, 2 different genes, broken in coding exons. Same orientation. Ambiguous reading frame |
| 760 | Fusion, same gene, broken in coding exons. Same orientation. Ambiguous reading frame |
| 740 | Fusion, 2 different genes, broken in ambiguous coding region. Same orientation. Ambiguous reading frame |
| 720 | Fusion, same gene, broken in ambiguous coding region. Same orientation. Ambiguous reading frame |
| 715 | Truncated protein product. Stop Codon formed at breakpoint junction |
| 710 | Out of frame fusion gene, 2 different genes, broken in coding exons. Same orientation. Reading frame different |
| 700 | Out of frame fusion gene, 2 different genes, broken in coding introns. Same orientation. Reading frame different |
| 690 | Out of frame fusion gene, same gene, broken in coding exons. Same orientation. Reading frame different |
| 680 | Out of frame fusion gene, same gene, broken in 2 different coding introns. Same orientation. Reading frame different |
| 660 | 5UTR to 3UTR fusion, different genes. Same orientation |
| 640 | 5UTR to 3UTR fusion, same gene. Same orientation |
| 620 | 3UTR to coding fusion, 2 different genes. 1 break in 3UTR, 1 break in coding region. Same orientation. Ambiguous reading frame |
| 600 | 3UTR to coding fusion, same gene. 1 break in 3UTR, 1 break in coding region. Same orientation. Ambiguous reading frame |
| 580 | fusion, 2 different genes. 1 break in 5UTR, 1 break in coding region. Opposite orientation. Ambiguous reading frame |
| 570 | fusion, same gene. 1 break in 5UTR, 1 break in coding region. Opposite orientation. Ambiguous reading frame |
| 560 | fusion, 2 different genes. 1 break in 3UTR, 1 break in coding region. Opposite orientation. Ambiguous reading frame |
| 550 | fusion, same gene. 1 break in 3UTR, 1 break in coding region. Opposite orientation. Ambiguous reading frame |
| 540 | fusion, 2 different genes, broken in coding introns. Opposite orientation. Ambiguous reading frame |
| 530 | fusion, same gene, broken in coding introns. Opposite orientation. Ambiguous reading frame |
| 520 | Fusion, 2 different genes, broken in coding exons. Opposite orientation. Ambiguous reading frame |
| 510 | Fusion, same gene, broken in coding exons. Opposite orientation. Ambiguous reading frame |
| 500 | Fusion, 2 different genes, broken in ambiguous coding region. Opposite orientation. Ambiguous reading frame |
| 490 | Fusion, same gene, broken in ambiguous coding region. Opposite orientation. Ambiguous reading frame |
| 460 | In frame fusion gene, same gene, broken in same coding intron. Same orientation. Reading frame unchanged |
| 450 | Fusion, same gene, broken in same coding intron. Different orientation. Ambiguous reading frame |
| 440 | 3UTR to 5UTR fusion, different genes. Same orientation |
| 420 | 3UTR to 5UTR fusion, same gene. Same orientation |
| 400 | 3UTR to 3UTR fusion, different genes. Same orientation |
| 380 | 3UTR to 3UTR fusion, same gene. Same orientation |
| 360 | 5UTR to 5UTR fusion, different genes. Different orientation |
| 350 | 5UTR to 5UTR fusion, same gene. Different orientation |
| 320 | 5UTR to 3UTR fusion, different genes. Different orientation |
| 310 | 5UTR to 3UTR fusion, same gene. Different orientation |
| 280 | 3UTR to 5UTR fusion, different genes. Different orientation |
| 270 | 3UTR to 5UTR fusion, same gene. Different orientation |
| 240 | 3UTR to 3UTR fusion, different genes. Different orientation |
| 230 | 3UTR to 3UTR fusion, same gene. Different orientation |
| 200 | Intron to something else fusion |
| 180 | Something else to intron fusion |
| 100 | Something else to something else fusion |
| 0 | No fusion |
| -1 unknown fusion |