Skip to content

Issues: colomemaria/epiScanpy

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

24 Open 28 Closed
24 Open 28 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

Issue with epi.pp.pca : Unexpected Argument Error
#139 opened Jun 13, 2024 by macelik
epi.ct.bld_mtx_bed drops information from certain threads
#138 opened Dec 15, 2023 by smithcathy
Installation on Mac M2
#137 opened Sep 19, 2023 by philmar1
1
Bug in silhouette score calculation
#134 opened Mar 20, 2023 by dhananjay-srivastava
Problems in importing the api after PyPI installation
#133 opened Dec 9, 2022 by zvittorio
2
Do we have method which can find tf-gene or peak-gene relation?
#132 opened Dec 1, 2022 by HelloWorldLTY
1
Import Error when Importing on Python 3.9
#130 opened Nov 21, 2022 by crsct
installation should say python 3.7 else SyntaxError: future feature annotations is not defined
#125 opened Sep 30, 2022 by megadesk
Questions about running time for epi.tl.geneactivity
#124 opened Sep 26, 2022 by HelloWorldLTY
Error in Generating Methylation Count Matrices
#122 opened Jun 25, 2022 by keyingkuang
2
Future plans
#120 opened May 5, 2022 by PauBadiaM
Plans to include other QC parameters for scATAC-seq data?
#117 opened Feb 15, 2022 by MinhTran789
How to generate count matrix in Episcanpy
#110 opened Nov 18, 2021 by taopeng1100
Error with normalize_total()
#109 opened Nov 8, 2021 by sjbegg
2
numpy>=1.21.2 requires python >= 3.7 but install docs show python 3.6
#108 opened Oct 4, 2021 by james-vincent
'IndexError: list index out of range' when running epi.tl.geneactivity()
#104 opened Aug 12, 2021 by pabloswfly
3
In DNA methylation tutorial, the data for matrices construction and secondary processing are not consistant.
#103 opened Aug 6, 2021 by qrzhang
1
Problems when generating matrix (episcanpy.ct.bld_mtx_fly())
#100 opened Jun 6, 2021 by malumbres
About snap2anndata
#83 opened Feb 28, 2021 by nigred
How are feature groups grouped together (rank_feat_groups_matrixplot)?
#73 opened Nov 25, 2020 by hildemann
1
Help needed in preprocessing scATAC-seq
#68 opened Sep 13, 2020 by alirezaomidi
1
Episcanpy is incompatible with scanpy 1.4.5post3
#50 opened Jan 27, 2020 by le-ander
1
Suggestion: add unit testing enhancement New feature or request
#48 opened Nov 27, 2019 by kridsadakorn
@kridsadakorn
multimodality
#31 opened Jul 12, 2019 by wangjiawen2013
3
ProTip! Add no:assignee to see everything that’s not assigned.