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1. epiScanpy epiScanpy Public

   Episcanpy: Epigenomics Single Cell Analysis in Python

   Python 144 33

2. epiAneufinder epiAneufinder Public

   R package to detect breakpoints and assign somies to scATAC-seq data

   HTML 40 9

3. benchmark_scrnaseq_cnv_callers benchmark_scrnaseq_cnv_callers Public

   Analysis pipeline used to benchmark scRNA-seq copy number variant callers

   R 4