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46 followers · 14 following
  • UCSC
  • Santa Cruz, CA, US

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Achievement: QuickdrawAchievement: Pull Sharkx3Achievement: Arctic Code Vault Contributor

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Achievement: QuickdrawAchievement: Pull Sharkx3Achievement: Arctic Code Vault Contributor

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  1. intronProspector Public

    Identify putative introns in RNA-Seq alignments

    C++ 5 1

  2. PrimerS-JuJu Public

    Tools to assist with primer design

    Python 2 1

  3. pipettor Public

    robust, easy to use Python package for running Unix process pipelines

    Python 2

416 contributions in the last year

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Contribution activity

March 2025

Created 11 commits in 3 repositories
Opened 1 pull request in 1 repository
BrooksLabUCSC/flair 1 merged

Created an issue in BrooksLabUCSC/flair that received 3 comments

flair collapse generates a confusing pysam error when nothing aligned

rm -rf output/test-collapse-seg1.tmp flair collapse -r input/seg1.cdna-ont.fastq -q expected/test-correct-seg1_all_corrected.bed -g input.tmp/genom…

3 comments
Opened 8 other issues in 2 repositories
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