Wally is a command-line application to plot aligned sequencing reads. This is the web frontend of wally. It can be run online as a web application at https://www.gear-genomics.com/wally.
Wally was original developed to visualize complex genomic rearrangements in cancer.
Tobias Rausch, Rene Snajder, Adrien Leger, Milena Simovic, Mădălina Giurgiu, Laura Villacorta, Anton G. Henssen, Stefan Fröhling, Oliver Stegle, Ewan Birney, Marc Jan Bonder, Aurelie Ernst, Jan O. Korbel
Long-read sequencing of diagnosis and post-therapy medulloblastoma reveals complex rearrangement patterns and epigenetic signatures
Cell Genomics, 2023, 100281, DOI: 10.1016/j.xgen.2023.100281