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@icgc-argo-workflows @ICGC-ARGO-Structural-Variation-CN-WG

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  1. AluScanCNV2 AluScanCNV2 Public

    AluScanCNV2 is an R package that integrates the cross-platform CNV detection and tumor prediction function on the basis of AluScanCNV software developed in the early stage.

    R 5 1

  2. ProfilePlots ProfilePlots Public

    Custom R scripts for drawing the three different presentations of mutational profiles, i.e., the alteration-group plot, context-group plot and mutation-rate diagram.

    R 1

  3. Xenium_5K_Visium_HD_Compare Xenium_5K_Visium_HD_Compare Public

    Jupyter Notebook 1

  4. pyXenium pyXenium Public

    Python

  5. SpatialPerturb SpatialPerturb Public

    Python