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option to use ClusterPointIndices for outlier removal #637

option to use ClusterPointIndices for outlier removal

option to use ClusterPointIndices for outlier removal #637

Workflow file for this run

on:
push:
branches:
- master
pull_request:
jobs:
ros:
runs-on: ubuntu-latest
container: ubuntu:18.04
continue-on-error: ${{ matrix.experimental }}
strategy:
fail-fast: false
matrix:
include:
- ROS_DISTRO: indigo
USE_DEB: true
NOT_TEST_INSTALL : true
USE_JENKINS: true
DOCKER_IMAGE_JENKINS: ros-ubuntu:14.04-pcl
BEFORE_SCRIPT : "sudo pip install numpy==1.16.6; sudo pip install scikit-learn==0.19.1 scipy==1.2.3; sudo pip install fcn chainercv chainer-mask-rcnn==0.3.0 decorator==4.4.2 chainer==6.7.0 protobuf==3.18.0 cupy-cuda91; sudo pip install requests[socks]==2.25.1"
experimental : false
- ROS_DISTRO: kinetic
USE_DEB: true
NOT_TEST_INSTALL : true
USE_JENKINS: true
DOCKER_IMAGE_JENKINS: ros-ubuntu:16.04-pcl
BEFORE_SCRIPT : "sudo pip install numpy==1.16.6; sudo pip install fcn chainercv chainer-mask-rcnn==0.3.0 decorator==4.4.2 chainer==6.7.0 protobuf==3.18.0 cupy-cuda91 pytesseract==0.3.6 python-dateutil==2.5.0; wget https://download.pytorch.org/whl/cu90/torch-1.1.0-cp27-cp27mu-linux_x86_64.whl -O torch-1.1.0-cp27-cp27mu-linux_x86_64.whl; wget https://download.pytorch.org/whl/cu90/torchvision-0.3.0-cp27-cp27mu-manylinux1_x86_64.whl -O torchvision-0.3.0-cp27-cp27mu-manylinux1_x86_64.whl; sudo pip install torch-1.1.0-cp27-cp27mu-linux_x86_64.whl torchvision-0.3.0-cp27-cp27mu-manylinux1_x86_64.whl;"
BUILD_PKGS: 'checkerboard_detector imagesift jsk_perception jsk_recognition_utils resized_image_transport'
experimental : false
- ROS_DISTRO: kinetic
USE_DEB: true
NOT_TEST_INSTALL : true
USE_JENKINS: true
DOCKER_IMAGE_JENKINS: ros-ubuntu:16.04-pcl
BEFORE_SCRIPT : "sudo pip install numpy==1.16.6; sudo pip install fcn chainercv chainer-mask-rcnn==0.3.0 decorator==4.4.2 chainer==6.7.0 protobuf==3.18.0 cupy-cuda91 pytesseract==0.3.6 python-dateutil==2.5.0; wget https://download.pytorch.org/whl/cu90/torch-1.1.0-cp27-cp27mu-linux_x86_64.whl -O torch-1.1.0-cp27-cp27mu-linux_x86_64.whl; wget https://download.pytorch.org/whl/cu90/torchvision-0.3.0-cp27-cp27mu-manylinux1_x86_64.whl -O torchvision-0.3.0-cp27-cp27mu-manylinux1_x86_64.whl; sudo pip install torch-1.1.0-cp27-cp27mu-linux_x86_64.whl torchvision-0.3.0-cp27-cp27mu-manylinux1_x86_64.whl;"
BUILD_PKGS: 'jsk_pcl_ros_utils jsk_pcl_ros'
experimental : false
- ROS_DISTRO: melodic
USE_DEB: true
NOT_TEST_INSTALL : true
USE_JENKINS: true
DOCKER_IMAGE_JENKINS: ros-ubuntu:18.04-pcl
BEFORE_SCRIPT : "sudo pip install numpy==1.16.6; sudo pip install fcn chainercv chainer-mask-rcnn==0.3.0 decorator==4.4.2 chainer==6.7.0 protobuf==3.18.0 cupy-cuda91 pytesseract==0.3.6; wget https://download.pytorch.org/whl/cu90/torch-1.1.0-cp27-cp27mu-linux_x86_64.whl -O torch-1.1.0-cp27-cp27mu-linux_x86_64.whl; wget https://download.pytorch.org/whl/cu90/torchvision-0.3.0-cp27-cp27mu-manylinux1_x86_64.whl -O torchvision-0.3.0-cp27-cp27mu-manylinux1_x86_64.whl; sudo pip install torch-1.1.0-cp27-cp27mu-linux_x86_64.whl torchvision-0.3.0-cp27-cp27mu-manylinux1_x86_64.whl;"
BUILD_PKGS: 'checkerboard_detector imagesift jsk_perception jsk_recognition_utils resized_image_transport'
experimental : false
- ROS_DISTRO: melodic
USE_DEB: true
NOT_TEST_INSTALL : true
USE_JENKINS: true
DOCKER_IMAGE_JENKINS: ros-ubuntu:18.04-pcl
BEFORE_SCRIPT : "sudo pip install numpy==1.16.6; sudo pip install fcn chainercv chainer-mask-rcnn==0.3.0 decorator==4.4.2 chainer==6.7.0 protobuf==3.18.0 cupy-cuda91 pytesseract==0.3.6; wget https://download.pytorch.org/whl/cu90/torch-1.1.0-cp27-cp27mu-linux_x86_64.whl -O torch-1.1.0-cp27-cp27mu-linux_x86_64.whl; wget https://download.pytorch.org/whl/cu90/torchvision-0.3.0-cp27-cp27mu-manylinux1_x86_64.whl -O torchvision-0.3.0-cp27-cp27mu-manylinux1_x86_64.whl; sudo pip install torch-1.1.0-cp27-cp27mu-linux_x86_64.whl torchvision-0.3.0-cp27-cp27mu-manylinux1_x86_64.whl;"
BUILD_PKGS: 'jsk_pcl_ros_utils jsk_pcl_ros'
experimental : false
- ROS_DISTRO: melodic
USE_DEB: true
NOT_TEST_INSTALL : true
USE_JENKINS: true
DOCKER_IMAGE_JENKINS: ros-ubuntu:18.04-pcl
# check https://github.com/jsk-ros-pkg/jsk_recognition/pull/2533
BEFORE_SCRIPT : "sudo pip uninstall -y fcn chainer chainercv decorator cupy-cuda91 pytesseract==0.3.6; sudo ln -sf /bin/echo /usr/local/bin/pip; sudo ln -sf /bin/echo /usr/local/bin/pip2"
TEST_PKGS : "jsk_recognition_msgs"
experimental : false
- ROS_DISTRO: noetic
USE_DEB: false
NOT_TEST_INSTALL : true
USE_JENKINS: true
DOCKER_IMAGE_JENKINS: ros-ubuntu:20.04-pcl
BEFORE_SCRIPT : "sudo pip3 install numpy==1.17.5 scipy==1.3.3 scikit-image==0.16.2 PyWavelets==0.5.1 imageio==2.4.1 pandas==0.25.3; sudo pip3 install fcn chainercv chainer-mask-rcnn==0.3.0 decorator==4.4.2 chainer==7.8.1 protobuf==3.6.1 cupy-cuda91 pytesseract==0.3.10 Pillow==9.3.0 torch==1.4.0 torchvision==0.5.0;sudo dpkg -i /workspace/.ros/data/libpcl-features1.10_1.10.0+dfsg-5ubuntu1_amd64.deb;"
BUILD_PKGS: 'checkerboard_detector imagesift jsk_perception jsk_recognition_utils resized_image_transport'
EXTRA_DEB: ros-noetic-pr2-description
experimental : false
- ROS_DISTRO: noetic
USE_DEB: false
NOT_TEST_INSTALL : true
USE_JENKINS: true
DOCKER_IMAGE_JENKINS: ros-ubuntu:20.04-pcl
TEST_PKGS : 'jsk_pcl_ros_utils jsk_pcl_ros'
BEFORE_SCRIPT : "sudo pip3 install numpy==1.17.5 scipy==1.3.3 scikit-image==0.16.2 PyWavelets==0.5.1 imageio==2.4.1 pandas==0.25.3; sudo pip3 install fcn chainercv chainer-mask-rcnn==0.3.0 decorator==4.4.2 chainer==7.8.1 protobuf==3.6.1 cupy-cuda91 pytesseract==0.3.10 Pillow==9.3.0 torch==1.4.0 torchvision==0.5.0;sudo dpkg -i /workspace/.ros/data/libpcl-features1.10_1.10.0+dfsg-5ubuntu1_amd64.deb;"
BUILD_PKGS: 'jsk_pcl_ros_utils jsk_pcl_ros'
EXTRA_DEB: ros-noetic-pr2-description
experimental : false
- ROS_DISTRO: noetic
USE_DEB: false
NOT_TEST_INSTALL : true
USE_JENKINS: true
DOCKER_IMAGE_JENKINS: ros-ubuntu:20.04-pcl
TEST_PKGS : 'jsk_recognition_msgs' # to skip test
BEFORE_SCRIPT : "sudo pip3 install numpy==1.17.5 scipy==1.3.3 scikit-image==0.16.2 PyWavelets==0.5.1 imageio==2.4.1 pandas==0.25.3; sudo pip3 install fcn chainercv chainer-mask-rcnn==0.3.0 decorator==4.4.2 chainer==7.8.1 protobuf==3.6.1 cupy-cuda91 pytesseract==0.3.10 Pillow==9.3.0 torch==1.4.0 torchvision==0.5.0;sudo dpkg -i /workspace/.ros/data/libpcl-features1.10_1.10.0+dfsg-5ubuntu1_amd64.deb;"
EXTRA_DEB: ros-noetic-pr2-description
experimental : false
steps:
- name: Install latest git ( use sudo for ros-ubuntu )
run: |
[ -e /etc/apt/sources.list.d/ubuntu-esm-infra-$(lsb_release -cs).list ] && sudo rm /etc/apt/sources.list.d/ubuntu-esm-infra-$(lsb_release -cs).list ## fix Err https://esm.ubuntu.com trusty-infra-security/main amd64 Packages, gnutls_handshake() failed: Handshake failed
(apt-get update && apt-get install -y sudo) || echo "OK"
(apt-get update && apt-get install -y sudo) || echo "OK"
sudo apt-get update
sudo apt-get install -y software-properties-common
sudo apt-get update
sudo -E add-apt-repository -y ppa:git-core/ppa
sudo apt-get update
sudo apt-get install -y git
- name: work around permission issue # https://github.com/actions/checkout/issues/760#issuecomment-1097501613
run: |
set -x
export USER=$(whoami)
if [ "${{ matrix.CONTAINER }}" = "jskrobotics/ros-ubuntu:*" ]; then
git config --global --add safe.directory $GITHUB_WORKSPACE || echo "OK" # Show 'could not lock config file /github/home/.gitconfig: Permission denied', but it is ok
sudo mkdir -p /__w/
sudo chmod 777 -R /__w/
sudo chown -R $USER $HOME
# sudo mkdir -p /home/runner/work/_temp/_github_workflow/
# sudo chown -R $USER $HOME /home/runner/work/_temp/_github_workflow/
# ls -al /home/runner/work/_temp/_github_workflow/
else
git config --global --add safe.directory $GITHUB_WORKSPACE
fi
- name: Chcekout
uses: actions/checkout@v2
with:
fetch-depth: 2
- name: Run jsk_travis
uses: jsk-ros-pkg/jsk_travis@master
with:
ROS_PARALLEL_JOBS : "-j8"
ROS_PARALLEL_TEST_JOBS : "-j1"
CATKIN_PARALLEL_TEST_JOBS : "-p1"
ROS_DISTRO : ${{ matrix.ROS_DISTRO }}
USE_DEB : ${{ matrix.USE_DEB }}
NOT_TEST_INSTALL : ${{ matrix.NOT_TEST_INSTALL }}
TEST_PKGS : ${{ matrix.TEST_PKGS }}
BUILD_PKGS : ${{ matrix.BUILD_PKGS }}
BEFORE_SCRIPT : ${{ matrix.BEFORE_SCRIPT }}
EXTRA_DEB : ${{ matrix.EXTRA_DEB }}
USE_JENKINS : ${{ matrix.USE_JENKINS }}
DOCKER_IMAGE_JENKINS : ${{ matrix.DOCKER_IMAGE_JENKINS }}
TIMEOUT_JENKINS : 180