Use optimized parameters according to optimization in issue #423

[marcelm]

The last PR to be split out from #426.

If we activate multi-context seeds only for certain read lengths, should we also only use optimized parameters for those read lengths?

To Do:

• Rebase once Add syncmers at ends of reads #452 has been merged.

[ksahlin]

If we activate multi-context seeds only for certain read lengths, should we also only use optimized parameters for those read lengths?

Good point

[marcelm]

Closing as it is out of date. (There has been at least one more recent parameter optimization since then.)