Changelog

#476: Improve accuracy by enabling (by default) a variant of multi-context seeds: When no regular seeds - which consist of two strobes - can be found for the entire query, strobealign now always attempts to find single-strobe ("partial") seeds. The --mcs option is still available for now. It is a bit slower, but slightly more accurate.
#492: Switch to “asymmetric randstrobes”, which makes the code simpler and even leads to some speedups and increased accuracy for very short reads.
#489: Speed up mapping by a few percent by avoiding to process repetitive hits any further as soon it is clear that we need to start over with different thresholds anyway.
#468: Be less strict when checking reference sequence names.

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