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v0.3.0

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@modkit-bot modkit-bot released this 21 May 17:30
· 84 commits to master since this release

Fixes

  • [validate] Fix bug where observations were not being balanced correctly.
  • [dmr] Revert noodles to 0.50.0, partially fixes #178.

Adds

  • [find-motifs] Add command to find motif sequences that are enriched for base modification.
  • [entropy] Add command to calculate methylation entropy.
  • [dmr] Add --segment option to categorize modified positions into contiguous "same" and "different" groups.
  • [pileup] Add --header option to emit a column header.

Deprecations

  • [pileup] Change output to always be all-tab delimited, next version will error with --only-tabs flag.