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merge: Support sequences with cross-checking #2934

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merge: Support sequences with cross-checking

merge: Support sequences with cross-checking #2934

Triggered via pull request October 22, 2024 23:03
@victorlinvictorlin
synchronize #1601
victorlin/merge-sequences
Status Failure
Total duration 11m 17s
Artifacts 13

ci.yaml

on: pull_request
Matrix: pytest-cram
mypy
48s
mypy
pyright
15s
pyright
build-docs  /  build
1m 2s
build-docs / build
check-docs
38s
check-docs
Matrix: pathogen-repo-ci-v0
Matrix: pathogen-repo-ci
release
0s
release
codecov
0s
codecov
rebuild-docker-image
0s
rebuild-docker-image
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Annotations

18 errors and 3 warnings
build-docs / build
Process completed with exit code 2.
pathogen-repo-ci (measles)
Process completed with exit code 1.
pathogen-repo-ci (measles)
Process completed with exit code 1.
test (python=3.8 biopython=1.80)
Process completed with exit code 1.
test (python=3.8 biopython=latest)
The job was canceled because "_3_8_1_80" failed.
test (python=3.8 biopython=latest)
The operation was canceled.
test (python=3.9 biopython=1.80)
The job was canceled because "_3_8_1_80" failed.
test (python=3.9 biopython=1.80)
The operation was canceled.
test (python=3.10 biopython=latest)
The job was canceled because "_3_8_1_80" failed.
test (python=3.10 biopython=latest)
The operation was canceled.
test (python=3.11 biopython=1.80)
The job was canceled because "_3_8_1_80" failed.
test (python=3.11 biopython=1.80)
The operation was canceled.
test (python=3.10 biopython=1.80)
The job was canceled because "_3_8_1_80" failed.
test (python=3.10 biopython=1.80)
The operation was canceled.
test (python=3.11 biopython=latest)
The job was canceled because "_3_8_1_80" failed.
test (python=3.11 biopython=latest)
The operation was canceled.
test (python=3.9 biopython=latest)
The job was canceled because "_3_8_1_80" failed.
test (python=3.9 biopython=latest)
The operation was canceled.
pyright
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
check-docs
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
mypy
The `python-version` input is not set. The version of Python currently in `PATH` will be used.

Artifacts

Produced during runtime
Name Size Digest
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1.32 MB
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output-ebola Expired
111 KB
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output-lassa Expired
322 KB
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output-measles Expired
3.5 MB
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output-mpox Expired
12.7 MB
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output-mumps Expired
339 KB
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output-ncov Expired
753 KB
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output-rsv Expired
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output-seasonal-cov Expired
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output-seasonal-flu Expired
51.4 KB
sha256:893d904d166e62330a5465e33a4c84c66b36538b04277f29556022c9ed345fc1
output-tb Expired
5.02 MB
sha256:2aad59efa18e735e2d478d23eb0b66f232581a7f2e8888b5f0f9c83564dca570
output-zika Expired
748 KB
sha256:589a82fc0ebf0e1e17a2a8b92ddcee9ea67061db5285e27c49a86e6444bb256a