New command: augur curate apply-date-bounds
#3647
ci.yaml
on: pull_request
Matrix: pytest-cram
mypy
55s
pyright
17s
build-docs
/
build
1m 25s
check-docs
39s
Matrix: pathogen-repo-ci-v0
Matrix: pathogen-repo-ci
codecov
15s
rebuild-docker-image
0s
Annotations
9 errors and 19 warnings
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check-docs
Process completed with exit code 1.
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pathogen-repo-ci (wnv)
Process completed with exit code 1.
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pathogen-repo-ci (wnv)
Process completed with exit code 1.
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pathogen-repo-ci (seasonal-cov)
Process completed with exit code 1.
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pathogen-repo-ci (seasonal-cov)
Process completed with exit code 1.
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pathogen-repo-ci (oropouche)
Process completed with exit code 1.
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pathogen-repo-ci (oropouche)
Process completed with exit code 1.
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pathogen-repo-ci (lassa)
Process completed with exit code 1.
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pathogen-repo-ci (lassa)
Process completed with exit code 1.
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pyright
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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mypy
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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pathogen-repo-ci (wnv)
Failed to save: Unable to reserve cache with key 2025-06-11-linux-64-augur-args-30d39f4-root-dcc80ee-bin-[object Promise], another job may be creating this cache.
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pathogen-repo-ci (seasonal-cov)
Failed to save: Unable to reserve cache with key 2025-06-11-linux-64-augur-args-30d39f4-root-dcc80ee-bin-[object Promise], another job may be creating this cache.
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pathogen-repo-ci (mumps)
Failed to save: Unable to reserve cache with key 2025-06-11-linux-64-augur-args-30d39f4-root-dcc80ee-bin-[object Promise], another job may be creating this cache.
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pathogen-repo-ci-v0 (avian-flu)
Failed to save: Unable to reserve cache with key 2025-06-11-linux-64-augur-args-30d39f4-root-dcc80ee-bin-[object Promise], another job may be creating this cache.
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pathogen-repo-ci-v0 (ebola)
Failed to save: Unable to reserve cache with key 2025-06-11-linux-64-augur-args-30d39f4-root-dcc80ee-bin-[object Promise], another job may be creating this cache.
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pathogen-repo-ci-v0 (ncov)
Failed to save: Unable to reserve cache with key 2025-06-11-linux-64-augur-args-30d39f4-root-dcc80ee-bin-[object Promise], another job may be creating this cache.
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pathogen-repo-ci (oropouche)
Failed to save: Unable to reserve cache with key 2025-06-11-linux-64-augur-args-30d39f4-root-dcc80ee-bin-[object Promise], another job may be creating this cache.
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pathogen-repo-ci-v0 (seasonal-flu)
Failed to save: Unable to reserve cache with key 2025-06-11-linux-64-augur-args-30d39f4-root-dcc80ee-bin-[object Promise], another job may be creating this cache.
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pathogen-repo-ci (mpox)
Failed to save: Unable to reserve cache with key 2025-06-11-linux-64-augur-args-30d39f4-root-dcc80ee-bin-[object Promise], another job may be creating this cache.
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pathogen-repo-ci (zika)
Failed to save: Unable to reserve cache with key 2025-06-11-linux-64-augur-args-30d39f4-root-dcc80ee-bin-[object Promise], another job may be creating this cache.
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pathogen-repo-ci (lassa)
Failed to save: Unable to reserve cache with key 2025-06-11-linux-64-augur-args-30d39f4-root-dcc80ee-bin-[object Promise], another job may be creating this cache.
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pathogen-repo-ci (measles)
Failed to save: Unable to reserve cache with key 2025-06-11-linux-64-augur-args-30d39f4-root-dcc80ee-bin-[object Promise], another job may be creating this cache.
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pathogen-repo-ci-v0 (tb)
Failed to save: Unable to reserve cache with key 2025-06-11-linux-64-augur-args-30d39f4-root-dcc80ee-bin-[object Promise], another job may be creating this cache.
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pathogen-repo-ci (dengue)
Failed to save: Unable to reserve cache with key 2025-06-11-linux-64-augur-args-30d39f4-root-dcc80ee-bin-[object Promise], another job may be creating this cache.
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pathogen-repo-ci (rabies)
Failed to save: Unable to reserve cache with key 2025-06-11-linux-64-augur-args-30d39f4-root-dcc80ee-bin-[object Promise], another job may be creating this cache.
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pathogen-repo-ci-v0 (rsv)
Failed to save: Unable to reserve cache with key 2025-06-11-linux-64-augur-args-30d39f4-root-dcc80ee-bin-[object Promise], another job may be creating this cache.
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codecov
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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Artifacts
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coverage
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179 KB |
sha256:ac8a20cf9e9c588793bfc87b052a8725f99a4cad256eb63d5217d89ba057aa67
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output-avian-flu
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97.3 KB |
sha256:6fe3e1e8481f045423bb1ba88a4286f94ae2d578f1747acd1d376c3d456b6f03
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output-dengue
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1.22 MB |
sha256:810ae66b21a5e98e76a423420517a4751f3051692dd57a76efdb20ed0dfd60ff
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output-ebola
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115 KB |
sha256:d8cefad9a2b0114f2b03bb4a5569610986a0c2a44abdab8c2f34e9761e89bb62
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output-lassa
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666 KB |
sha256:6553ece5da68b56cd92b88ae92d75eebeee8856dcb94d2b8610c7f9a9e0fbac6
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output-measles
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3.88 MB |
sha256:8d49e6f2ea852dc940eb53398ce7b61c3447b159090e141b87da8cc2d16384b7
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output-mpox
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12.8 MB |
sha256:f6fc7e1738e97ed6ffe0353e1ca52618748c6da5c48e1526689a4fb77a1d17bd
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output-mumps
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297 KB |
sha256:47b76a7444d9bf9ebdd384773a58f1f43563d2184912f03ef59e529813ea9e18
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output-ncov
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715 KB |
sha256:da9b805b357496bb805fffc7b7fca6eadab03db29e8cfd5ef64f0605d09461ea
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output-oropouche
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419 KB |
sha256:94bdb32f151fd2f0f39a77d5b33b9b1a5ebfcfc333f494d5e401d9b0d4bf8999
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output-rabies
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5.24 MB |
sha256:06b6929a3c00b37c2b7ea169e438d680757818d4fdce88efb3f55d50ea5ada54
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output-rsv
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9.88 MB |
sha256:bbadccc52b4fe25198c039768b859c8afaebf4e54524c9808173d0a41ceb390b
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output-seasonal-cov
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1.58 MB |
sha256:6a9df40d0ff658d081dfbb571e8bd7d132483b90d6381584cc939e75d844cf2e
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output-seasonal-flu
Expired
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54.4 KB |
sha256:f1f01048251c27ea05dfd706d8a62449bd758bd530af38205cdd04b00716b25f
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output-tb
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5.03 MB |
sha256:d39002cc9e2c4f42031b6fc464e7df366a983c96a777b4477b7255f434393706
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output-wnv
Expired
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89.3 KB |
sha256:ec3fea23e4b708a0960ca8525e4f393a726fdfc257400b100c2f9a8739c4b282
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output-yellow-fever
Expired
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2.11 MB |
sha256:ec4673bec71b67eead0c2606fb8bc428de3877184c1c4500fa2a4ca6e466c865
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output-zika
Expired
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785 KB |
sha256:a767f3a3b9e3f608813af935eb881facf74afcbece3e0b83b8c053c55175cd60
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