filter: Use tsv-utils for --output-strains and --output-metadata
#3715
victorlinci.yaml
on: pull_request
Matrix: pytest-cram
mypy
54s
pyright
13s
build-docs
/
build
1m 25s
check-docs
40s
Matrix: pathogen-repo-ci-v0
Matrix: pathogen-repo-ci
codecov
0s
rebuild-docker-image
0s
Annotations
21 errors and 2 warnings
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test (python=3.9 biopython=1.80)
Process completed with exit code 1.
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test (python=3.10 biopython=1.82)
The operation was canceled.
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test (python=3.10 biopython=1.82)
The strategy configuration was canceled because "pytest-cram._3_9_1_80" failed
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test (python=3.9 biopython=1.82)
The operation was canceled.
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test (python=3.9 biopython=1.82)
The strategy configuration was canceled because "pytest-cram._3_9_1_80" failed
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test (python=3.11 biopython=1.82)
The operation was canceled.
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test (python=3.11 biopython=1.82)
The strategy configuration was canceled because "pytest-cram._3_9_1_80" failed
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test (python=3.11 biopython=latest)
The operation was canceled.
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test (python=3.12 biopython=latest)
The operation was canceled.
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test (python=3.11 biopython=latest)
The strategy configuration was canceled because "pytest-cram._3_9_1_80" failed
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test (python=3.12 biopython=latest)
The strategy configuration was canceled because "pytest-cram._3_9_1_80" failed
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test (python=3.11 biopython=1.80)
The operation was canceled.
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test (python=3.11 biopython=1.80)
The strategy configuration was canceled because "pytest-cram._3_9_1_80" failed
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test (python=3.10 biopython=1.80)
The operation was canceled.
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test (python=3.10 biopython=1.80)
The strategy configuration was canceled because "pytest-cram._3_9_1_80" failed
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test (python=3.10 biopython=latest)
The operation was canceled.
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test (python=3.10 biopython=latest)
The strategy configuration was canceled because "pytest-cram._3_9_1_80" failed
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test (python=3.12 biopython=1.82)
The operation was canceled.
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test (python=3.12 biopython=1.82)
The strategy configuration was canceled because "pytest-cram._3_9_1_80" failed
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test (python=3.9 biopython=latest)
The operation was canceled.
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test (python=3.9 biopython=latest)
The strategy configuration was canceled because "pytest-cram._3_9_1_80" failed
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pyright
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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mypy
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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Artifacts
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output-avian-flu
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97.7 KB |
sha256:82b94fd992986d4c8dafe1673c4b1b6e40cfc4c06ca9a77c4796cf07aa57e7f0
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output-dengue
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1.22 MB |
sha256:e7677ebf0607e0b40031cc0e3e1a020f0828968a1bd044fef5622fe4af35b257
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output-ebola
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112 KB |
sha256:f78f4d3176340e6ae1989d5ee24abb4c6a1f0a143a4eb439da6efefde6349eb5
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output-lassa
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1.5 MB |
sha256:8799c95de2a9a7d4a294de671e847c6598fe87c2a9c23576aa63f7a8746a27e1
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output-measles
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3.9 MB |
sha256:3c76690b7d8d20a80839765142d9f54b4419bfb3aa8452bbab7a6c9e5e0ebcc9
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output-mpox
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sha256:07dd875bd71e72f6d547341b5975c3aef379032e68c37b69de9ec66f044a76b2
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output-mumps
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sha256:d7e3cfb37e6d49a7052707b2cf9d7f5dc01863ab0204476483dd3ee0f4724b4b
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output-ncov
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714 KB |
sha256:b3933ab9b6fb0d701d3424bdc831532e854d7309c976146131c028a8f0ddbedc
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output-oropouche
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sha256:ad44690d09dd1f7818eec077ab4a9d0d2d6567c11366ba20e9b65ed48523bc31
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output-rabies
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5.26 MB |
sha256:3be69730f53e4deb6d88ad51e90c09d8a915f8e1ee2772ab0e944900ad8093cb
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output-rsv
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9.87 MB |
sha256:742e961599a9dd56dabb5ebd072f938b3af6edbe7f66a264c48cf435f12682d4
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output-seasonal-cov
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2.32 MB |
sha256:a9e99cec223f60baceb94acf12acd88506d9eb8d6e3cc7e846e4c36bbfa9ee8c
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output-seasonal-flu
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54.3 KB |
sha256:b73207bd8758218c9d2bccbdf72dfd295c9638b3487025b2b6997a19dc9f13e3
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output-tb
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5.03 MB |
sha256:32dd368dd45a71ea5eca3e8bb88c4bf192666649c88f64a4669d0a0e127109e4
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output-wnv
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188 KB |
sha256:12680234e5f8df101cdd7fd6f56b478fa189ca274bdea80cfc22acf067fabe39
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output-yellow-fever
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2.11 MB |
sha256:63174940dcd84dab74dda5b2a4161ea5fc16548df5b09170bc5d951a4f9c4ff9
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output-zika
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791 KB |
sha256:4616ea6d796cf2a2064f3d37ee8a2543e6ad6b71353584327aea671f3c71ff84
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