refine: warn if doing timetree and there's apparent mismatch between metadata and sequence ids #3958
corneliusroemerci.yaml
on: pull_request
Matrix: pytest-cram
mypy
1m 10s
pyright
24s
build-docs
/
build
1m 17s
check-docs
45s
check-subsample-config-schema
1m 0s
Matrix: pathogen-repo-ci-v0
Matrix: pathogen-repo-ci
codecov
18s
rebuild-docker-image
0s
Annotations
1 error and 4 warnings
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build-docs / build
Process completed with exit code 2.
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pyright
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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check-subsample-config-schema
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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mypy
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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codecov
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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Artifacts
Produced during runtime
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coverage
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189 KB |
sha256:ce83b49b20e2a2a1805152b76b8f5910f2ba5d583c24979ed33ada219df017c5
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output-avian-flu
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98.1 KB |
sha256:bbb30d84eaf0302dd8fd2afa8f2a5658b72963898e42a37e5cfbec1bcfd1a442
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output-dengue
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435 KB |
sha256:d37ecaa189591ceb4ff9cb1ef6e29dc031c1c84d1113b86c376c937ba74824f2
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output-lassa
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1.52 MB |
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output-measles
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3.9 MB |
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output-mpox
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14.4 MB |
sha256:699bb9ac3bbe6a17875c09eb2e3c56406b28099e806a5c653c97953219766b3d
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output-mumps
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311 KB |
sha256:72ab26bdfdfa5eb7048745576b99e072e06136daa70bf13e5295c90719b53f72
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output-ncov
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716 KB |
sha256:7a86fe2c6925e5207ee84b1bcf32cb51bdf6131f2245bf2e4d5a4cd60b96501b
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output-oropouche
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588 KB |
sha256:e73cf527d2e40ed088be36477fa237ea3ddcc8880a9c0053263f66d252385484
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output-rabies
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5.27 MB |
sha256:6ec8332a4d8151a88c54bb2bc8fc9ae17c5aca33ffc4a8a101ae250269be0048
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output-rsv
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1.2 MB |
sha256:ec70b523a6b35dce92e29b0ee9fd8df746a694659f75d643aea588db39fb69cd
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output-seasonal-cov
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2.51 MB |
sha256:74728a212e3a37f525bfefed1c2244c019854ff7e0a14a2b60a5feb2291a0036
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output-seasonal-flu
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60.3 KB |
sha256:1669557adba5dfd725f768b2cd5df03ff071d3c695f59374b91e0cc71910af28
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output-tb
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5.03 MB |
sha256:ad5f3c5ab632c88c7f7b4bdf46a5bb1436b1d9e83de4b08b4c40f65f698e4e62
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output-wnv
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241 KB |
sha256:c793e6f38eb8e3c7e039f3b2a745d323a8e49d6da2b6b31486292af5889885e9
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output-yellow-fever
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2.12 MB |
sha256:e30fd15a305ab5667d4be35d4df550007d0032874803314f56720fcb78177a3a
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output-zika
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807 KB |
sha256:c958a6e7841e773c4a734c02db77d9d3283657d585b7dfd966bafe40efdeff85
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