refine: warn if doing timetree and there's apparent mismatch between metadata and sequence ids #3961
corneliusroemerci.yaml
on: pull_request
Matrix: pytest-cram
mypy
52s
pyright
20s
build-docs
/
build
1m 6s
check-docs
39s
check-subsample-config-schema
39s
Matrix: pathogen-repo-ci-v0
Matrix: pathogen-repo-ci
codecov
16s
rebuild-docker-image
0s
Annotations
1 error and 4 warnings
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build-docs / build
Process completed with exit code 2.
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pyright
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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check-subsample-config-schema
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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mypy
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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codecov
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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Artifacts
Produced during runtime
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coverage
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190 KB |
sha256:7405d7808539a1f71562030813e474b69c47845cd4dfbde7946287f78159f3ca
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output-avian-flu
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98.2 KB |
sha256:4eacf4bc61fd86e489bed635c35ad0020358da8841be4c8cb88706e16c661881
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output-dengue
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437 KB |
sha256:8d7a223f52c106117101493a552e258ee8c17551df96d1efab0542dd8cf30d8c
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output-lassa
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1.52 MB |
sha256:809eda0e6e39e2ff791c0b8f881742d40d14b12f59a0bdfb7a619cf13c8b1980
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output-measles
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3.91 MB |
sha256:fec0a52d2e56f3f8e563af20796befe1d54bc67634d1e6d18a5156cbc42e8b83
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output-mpox
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14.4 MB |
sha256:9f93591b3741f9feed2090d60d69edf574b05844edf7e03b70006bd8a83220f6
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output-mumps
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310 KB |
sha256:1090e4aa868ee7b5607b543867c2c436d694b24ae521a7d98010acb108d31d5a
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output-ncov
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717 KB |
sha256:6b4de8c11db5bd38e58f04225868ebb3cfc0c4660a7d27beab62d351dab34df9
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output-oropouche
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588 KB |
sha256:7c397c6ab4ca8bc62fe444b7dd74d19aab5931d427d52e94dbc3f3c945abb99a
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output-rabies
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5.27 MB |
sha256:2a31c74bd6de1e4474315abf3411aaade08773da25c86145ca5b25c0d42191c1
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output-rsv
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1.2 MB |
sha256:ecd52ffd34105281c573e3817226c97c9e18b691a5bcdbf3df00aad875333688
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output-seasonal-cov
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2.46 MB |
sha256:77ce72f2d7e20e16a23d23dad9c527bb3fa9ef5dfbfd3c8969d24670912b719f
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output-seasonal-flu
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60.3 KB |
sha256:bf92816e4d165756790a00743dff464414bd1cfe807fd4d5e3b5edbdb974244b
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output-tb
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5.03 MB |
sha256:6f7dc0130c9c2239d5e578e41ee26ce15edbefd1324e851b47edb4074f31f08e
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output-wnv
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241 KB |
sha256:20aac19b5040b24bee82b4c8cd7ba8db15097798862422a9bc3c4d574fe5cf68
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output-yellow-fever
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2.12 MB |
sha256:1530c70df46304b6c02bc20ce7527d711e10ee096cbeb25e3ff207551411e0ce
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output-zika
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807 KB |
sha256:b681b590c6bbd8e6747142aff1efe269f0151b105d682797c60dc28e55dcd140
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