Improve error handling in curate apply-geolocation-rules
#3962
ci.yaml
on: pull_request
Matrix: pytest-cram
mypy
57s
pyright
23s
build-docs
/
build
1m 15s
check-docs
45s
check-subsample-config-schema
50s
Matrix: pathogen-repo-ci-v0
Matrix: pathogen-repo-ci
codecov
17s
rebuild-docker-image
0s
Annotations
1 error and 19 warnings
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build-docs / build
Process completed with exit code 2.
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pyright
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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check-subsample-config-schema
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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mypy
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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pathogen-repo-ci-v0 (avian-flu)
Failed to save: Unable to reserve cache with key 2025-10-10-linux-64-augur-args-30d39f4-root-dcc80ee-bin-d2edc1ba4d7ee2a8dabe8913906c08a42cf169bb65e50fc0d53a37b44e2bdd1e, another job may be creating this cache.
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pathogen-repo-ci-v0 (seasonal-flu)
Failed to save: Unable to reserve cache with key 2025-10-10-linux-64-augur-args-30d39f4-root-dcc80ee-bin-d2edc1ba4d7ee2a8dabe8913906c08a42cf169bb65e50fc0d53a37b44e2bdd1e, another job may be creating this cache.
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pathogen-repo-ci-v0 (ncov)
Failed to save: Unable to reserve cache with key 2025-10-10-linux-64-augur-args-30d39f4-root-dcc80ee-bin-d2edc1ba4d7ee2a8dabe8913906c08a42cf169bb65e50fc0d53a37b44e2bdd1e, another job may be creating this cache.
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pathogen-repo-ci-v0 (rsv)
Failed to save: Unable to reserve cache with key 2025-10-10-linux-64-augur-args-30d39f4-root-dcc80ee-bin-d2edc1ba4d7ee2a8dabe8913906c08a42cf169bb65e50fc0d53a37b44e2bdd1e, another job may be creating this cache.
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pathogen-repo-ci (wnv)
Failed to save: Unable to reserve cache with key 2025-10-10-linux-64-augur-args-30d39f4-root-dcc80ee-bin-d2edc1ba4d7ee2a8dabe8913906c08a42cf169bb65e50fc0d53a37b44e2bdd1e, another job may be creating this cache.
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pathogen-repo-ci (mumps)
Failed to save: Unable to reserve cache with key 2025-10-10-linux-64-augur-args-30d39f4-root-dcc80ee-bin-d2edc1ba4d7ee2a8dabe8913906c08a42cf169bb65e50fc0d53a37b44e2bdd1e, another job may be creating this cache.
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pathogen-repo-ci (mpox)
Failed to save: Unable to reserve cache with key 2025-10-10-linux-64-augur-args-30d39f4-root-dcc80ee-bin-d2edc1ba4d7ee2a8dabe8913906c08a42cf169bb65e50fc0d53a37b44e2bdd1e, another job may be creating this cache.
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pathogen-repo-ci (dengue)
Failed to save: Unable to reserve cache with key 2025-10-10-linux-64-augur-args-30d39f4-root-dcc80ee-bin-d2edc1ba4d7ee2a8dabe8913906c08a42cf169bb65e50fc0d53a37b44e2bdd1e, another job may be creating this cache.
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pathogen-repo-ci-v0 (tb)
Failed to save: Unable to reserve cache with key 2025-10-10-linux-64-augur-args-30d39f4-root-dcc80ee-bin-d2edc1ba4d7ee2a8dabe8913906c08a42cf169bb65e50fc0d53a37b44e2bdd1e, another job may be creating this cache.
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pathogen-repo-ci (zika)
Failed to save: Unable to reserve cache with key 2025-10-10-linux-64-augur-args-30d39f4-root-dcc80ee-bin-d2edc1ba4d7ee2a8dabe8913906c08a42cf169bb65e50fc0d53a37b44e2bdd1e, another job may be creating this cache.
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pathogen-repo-ci (measles)
Failed to save: Unable to reserve cache with key 2025-10-10-linux-64-augur-args-30d39f4-root-dcc80ee-bin-d2edc1ba4d7ee2a8dabe8913906c08a42cf169bb65e50fc0d53a37b44e2bdd1e, another job may be creating this cache.
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pathogen-repo-ci (oropouche)
Failed to save: Unable to reserve cache with key 2025-10-10-linux-64-augur-args-30d39f4-root-dcc80ee-bin-d2edc1ba4d7ee2a8dabe8913906c08a42cf169bb65e50fc0d53a37b44e2bdd1e, another job may be creating this cache.
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pathogen-repo-ci (seasonal-cov)
Failed to save: Unable to reserve cache with key 2025-10-10-linux-64-augur-args-30d39f4-root-dcc80ee-bin-d2edc1ba4d7ee2a8dabe8913906c08a42cf169bb65e50fc0d53a37b44e2bdd1e, another job may be creating this cache.
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pathogen-repo-ci (yellow-fever)
Failed to save: Unable to reserve cache with key 2025-10-10-linux-64-augur-args-30d39f4-root-dcc80ee-bin-d2edc1ba4d7ee2a8dabe8913906c08a42cf169bb65e50fc0d53a37b44e2bdd1e, another job may be creating this cache.
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pathogen-repo-ci (rabies)
Failed to save: Unable to reserve cache with key 2025-10-10-linux-64-augur-args-30d39f4-root-dcc80ee-bin-d2edc1ba4d7ee2a8dabe8913906c08a42cf169bb65e50fc0d53a37b44e2bdd1e, another job may be creating this cache.
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codecov
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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Artifacts
Produced during runtime
| Name | Size | Digest | |
|---|---|---|---|
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coverage
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189 KB |
sha256:c7c84e7ef9e0ae96ff00a06ab5a8ce2a43d44236b0c753b1148f6ac39c8c4dd1
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output-avian-flu
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98.3 KB |
sha256:7afe5c98f00ad09cb8d268d71f86fe24966d01ad31e666e3b11617a9762d7dfc
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output-dengue
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436 KB |
sha256:da2ec8db96d452b9d7e2943b34998de46a73f1bc2c728fdf5af1b41417592f22
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output-lassa
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1.51 MB |
sha256:1b617ff2a217c23ae97b521008c06b9a0d4d91b5e2d0e3fb0fc4976ba584c3a1
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output-measles
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3.9 MB |
sha256:bbbc5a7b9ab4af015bea3ff3007f8fcad6106640e21a1b7d9e2fa303b4c299e7
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output-mpox
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14.4 MB |
sha256:ab189b6cd46182015b58bf0ea95687202026c850ac6ed6d73ae35f84c4c84f76
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output-mumps
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312 KB |
sha256:8f3f8fb4e41d963259de737d925f72afc10471f683ee68b8f45956800f3270be
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output-ncov
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716 KB |
sha256:f6dbf336471f74e316af71ac2ce32a7d66f38cda7e4e7f96b6b50896297c294a
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output-oropouche
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588 KB |
sha256:4f3f739b9d7e763b2688a07c62d24ae6b8ceb5423639db049d7bae634450cbf6
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output-rabies
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5.27 MB |
sha256:af83f3398c195410baa2376cb7ddbfbfb266543bab6a38679aa4ca28b2790281
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output-rsv
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1.2 MB |
sha256:05a3ff6c5a0fd6a8a8b28609818fbd484cc6539907ac244bc675774ab982a641
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output-seasonal-cov
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2.49 MB |
sha256:ce4364a69e6986f356e8bd8936e5102013af660d2b1242b007afcc25903a4424
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output-seasonal-flu
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60.3 KB |
sha256:4a8bb2fb318994927c540aad43ab838f34c8e8826cb6cb686e53e33898e85013
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output-tb
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5.03 MB |
sha256:7e521757729c0ebb92b4a3cc7bfeebde67a05fd149181557580033b323b10311
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output-wnv
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241 KB |
sha256:2a52c81533db286fa9676d83b919d7111e251bea75070302b948aae20cf36192
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output-yellow-fever
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2.11 MB |
sha256:9472d44a3814b573c4b96082f51013482f4a6a76ca2f34b6434fb495d90a40d7
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output-zika
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807 KB |
sha256:8c8edbf74226a54f9cd1c6f31ff131f20f41445d5d280b9e1d6439ec72b31fe3
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