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Improve error handling in curate apply-geolocation-rules #3962

Improve error handling in curate apply-geolocation-rules

Improve error handling in curate apply-geolocation-rules #3962

Triggered via pull request October 10, 2025 16:00
Status Failure
Total duration 31m 53s
Artifacts 17

ci.yaml

on: pull_request
Matrix: pytest-cram
Matrix: pathogen-repo-ci-v0
Matrix: pathogen-repo-ci
rebuild-docker-image
0s
rebuild-docker-image
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1 error and 19 warnings
build-docs / build
Process completed with exit code 2.
pyright
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
check-subsample-config-schema
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
mypy
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
pathogen-repo-ci-v0 (avian-flu)
Failed to save: Unable to reserve cache with key 2025-10-10-linux-64-augur-args-30d39f4-root-dcc80ee-bin-d2edc1ba4d7ee2a8dabe8913906c08a42cf169bb65e50fc0d53a37b44e2bdd1e, another job may be creating this cache.
pathogen-repo-ci-v0 (seasonal-flu)
Failed to save: Unable to reserve cache with key 2025-10-10-linux-64-augur-args-30d39f4-root-dcc80ee-bin-d2edc1ba4d7ee2a8dabe8913906c08a42cf169bb65e50fc0d53a37b44e2bdd1e, another job may be creating this cache.
pathogen-repo-ci-v0 (ncov)
Failed to save: Unable to reserve cache with key 2025-10-10-linux-64-augur-args-30d39f4-root-dcc80ee-bin-d2edc1ba4d7ee2a8dabe8913906c08a42cf169bb65e50fc0d53a37b44e2bdd1e, another job may be creating this cache.
pathogen-repo-ci-v0 (rsv)
Failed to save: Unable to reserve cache with key 2025-10-10-linux-64-augur-args-30d39f4-root-dcc80ee-bin-d2edc1ba4d7ee2a8dabe8913906c08a42cf169bb65e50fc0d53a37b44e2bdd1e, another job may be creating this cache.
pathogen-repo-ci (wnv)
Failed to save: Unable to reserve cache with key 2025-10-10-linux-64-augur-args-30d39f4-root-dcc80ee-bin-d2edc1ba4d7ee2a8dabe8913906c08a42cf169bb65e50fc0d53a37b44e2bdd1e, another job may be creating this cache.
pathogen-repo-ci (mumps)
Failed to save: Unable to reserve cache with key 2025-10-10-linux-64-augur-args-30d39f4-root-dcc80ee-bin-d2edc1ba4d7ee2a8dabe8913906c08a42cf169bb65e50fc0d53a37b44e2bdd1e, another job may be creating this cache.
pathogen-repo-ci (mpox)
Failed to save: Unable to reserve cache with key 2025-10-10-linux-64-augur-args-30d39f4-root-dcc80ee-bin-d2edc1ba4d7ee2a8dabe8913906c08a42cf169bb65e50fc0d53a37b44e2bdd1e, another job may be creating this cache.
pathogen-repo-ci (dengue)
Failed to save: Unable to reserve cache with key 2025-10-10-linux-64-augur-args-30d39f4-root-dcc80ee-bin-d2edc1ba4d7ee2a8dabe8913906c08a42cf169bb65e50fc0d53a37b44e2bdd1e, another job may be creating this cache.
pathogen-repo-ci-v0 (tb)
Failed to save: Unable to reserve cache with key 2025-10-10-linux-64-augur-args-30d39f4-root-dcc80ee-bin-d2edc1ba4d7ee2a8dabe8913906c08a42cf169bb65e50fc0d53a37b44e2bdd1e, another job may be creating this cache.
pathogen-repo-ci (zika)
Failed to save: Unable to reserve cache with key 2025-10-10-linux-64-augur-args-30d39f4-root-dcc80ee-bin-d2edc1ba4d7ee2a8dabe8913906c08a42cf169bb65e50fc0d53a37b44e2bdd1e, another job may be creating this cache.
pathogen-repo-ci (measles)
Failed to save: Unable to reserve cache with key 2025-10-10-linux-64-augur-args-30d39f4-root-dcc80ee-bin-d2edc1ba4d7ee2a8dabe8913906c08a42cf169bb65e50fc0d53a37b44e2bdd1e, another job may be creating this cache.
pathogen-repo-ci (oropouche)
Failed to save: Unable to reserve cache with key 2025-10-10-linux-64-augur-args-30d39f4-root-dcc80ee-bin-d2edc1ba4d7ee2a8dabe8913906c08a42cf169bb65e50fc0d53a37b44e2bdd1e, another job may be creating this cache.
pathogen-repo-ci (seasonal-cov)
Failed to save: Unable to reserve cache with key 2025-10-10-linux-64-augur-args-30d39f4-root-dcc80ee-bin-d2edc1ba4d7ee2a8dabe8913906c08a42cf169bb65e50fc0d53a37b44e2bdd1e, another job may be creating this cache.
pathogen-repo-ci (yellow-fever)
Failed to save: Unable to reserve cache with key 2025-10-10-linux-64-augur-args-30d39f4-root-dcc80ee-bin-d2edc1ba4d7ee2a8dabe8913906c08a42cf169bb65e50fc0d53a37b44e2bdd1e, another job may be creating this cache.
pathogen-repo-ci (rabies)
Failed to save: Unable to reserve cache with key 2025-10-10-linux-64-augur-args-30d39f4-root-dcc80ee-bin-d2edc1ba4d7ee2a8dabe8913906c08a42cf169bb65e50fc0d53a37b44e2bdd1e, another job may be creating this cache.
codecov
The `python-version` input is not set. The version of Python currently in `PATH` will be used.

Artifacts

Produced during runtime
Name Size Digest
coverage
189 KB
sha256:c7c84e7ef9e0ae96ff00a06ab5a8ce2a43d44236b0c753b1148f6ac39c8c4dd1
output-avian-flu
98.3 KB
sha256:7afe5c98f00ad09cb8d268d71f86fe24966d01ad31e666e3b11617a9762d7dfc
output-dengue
436 KB
sha256:da2ec8db96d452b9d7e2943b34998de46a73f1bc2c728fdf5af1b41417592f22
output-lassa
1.51 MB
sha256:1b617ff2a217c23ae97b521008c06b9a0d4d91b5e2d0e3fb0fc4976ba584c3a1
output-measles
3.9 MB
sha256:bbbc5a7b9ab4af015bea3ff3007f8fcad6106640e21a1b7d9e2fa303b4c299e7
output-mpox
14.4 MB
sha256:ab189b6cd46182015b58bf0ea95687202026c850ac6ed6d73ae35f84c4c84f76
output-mumps
312 KB
sha256:8f3f8fb4e41d963259de737d925f72afc10471f683ee68b8f45956800f3270be
output-ncov
716 KB
sha256:f6dbf336471f74e316af71ac2ce32a7d66f38cda7e4e7f96b6b50896297c294a
output-oropouche
588 KB
sha256:4f3f739b9d7e763b2688a07c62d24ae6b8ceb5423639db049d7bae634450cbf6
output-rabies
5.27 MB
sha256:af83f3398c195410baa2376cb7ddbfbfb266543bab6a38679aa4ca28b2790281
output-rsv
1.2 MB
sha256:05a3ff6c5a0fd6a8a8b28609818fbd484cc6539907ac244bc675774ab982a641
output-seasonal-cov
2.49 MB
sha256:ce4364a69e6986f356e8bd8936e5102013af660d2b1242b007afcc25903a4424
output-seasonal-flu
60.3 KB
sha256:4a8bb2fb318994927c540aad43ab838f34c8e8826cb6cb686e53e33898e85013
output-tb
5.03 MB
sha256:7e521757729c0ebb92b4a3cc7bfeebde67a05fd149181557580033b323b10311
output-wnv
241 KB
sha256:2a52c81533db286fa9676d83b919d7111e251bea75070302b948aae20cf36192
output-yellow-fever
2.11 MB
sha256:9472d44a3814b573c4b96082f51013482f4a6a76ca2f34b6434fb495d90a40d7
output-zika
807 KB
sha256:8c8edbf74226a54f9cd1c6f31ff131f20f41445d5d280b9e1d6439ec72b31fe3