CI #3963
corneliusroemerci.yaml
on: schedule
Matrix: pytest-cram
mypy
58s
pyright
27s
build-docs
/
build
1m 25s
check-docs
45s
check-subsample-config-schema
45s
Matrix: pathogen-repo-ci-v0
Matrix: pathogen-repo-ci
codecov
13s
rebuild-docker-image
Annotations
1 error and 19 warnings
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build-docs / build
Process completed with exit code 2.
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pyright
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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check-subsample-config-schema
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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mypy
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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pathogen-repo-ci-v0 (avian-flu)
Failed to save: Unable to reserve cache with key 2025-10-10-linux-64-augur-args-30d39f4-root-dcc80ee-bin-d2edc1ba4d7ee2a8dabe8913906c08a42cf169bb65e50fc0d53a37b44e2bdd1e, another job may be creating this cache.
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pathogen-repo-ci-v0 (seasonal-flu)
Failed to save: Unable to reserve cache with key 2025-10-10-linux-64-augur-args-30d39f4-root-dcc80ee-bin-d2edc1ba4d7ee2a8dabe8913906c08a42cf169bb65e50fc0d53a37b44e2bdd1e, another job may be creating this cache.
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pathogen-repo-ci (mumps)
Failed to save: Unable to reserve cache with key 2025-10-10-linux-64-augur-args-30d39f4-root-dcc80ee-bin-d2edc1ba4d7ee2a8dabe8913906c08a42cf169bb65e50fc0d53a37b44e2bdd1e, another job may be creating this cache.
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pathogen-repo-ci (wnv)
Failed to save: Unable to reserve cache with key 2025-10-10-linux-64-augur-args-30d39f4-root-dcc80ee-bin-d2edc1ba4d7ee2a8dabe8913906c08a42cf169bb65e50fc0d53a37b44e2bdd1e, another job may be creating this cache.
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pathogen-repo-ci (dengue)
Failed to save: Unable to reserve cache with key 2025-10-10-linux-64-augur-args-30d39f4-root-dcc80ee-bin-d2edc1ba4d7ee2a8dabe8913906c08a42cf169bb65e50fc0d53a37b44e2bdd1e, another job may be creating this cache.
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pathogen-repo-ci-v0 (tb)
Failed to save: Unable to reserve cache with key 2025-10-10-linux-64-augur-args-30d39f4-root-dcc80ee-bin-d2edc1ba4d7ee2a8dabe8913906c08a42cf169bb65e50fc0d53a37b44e2bdd1e, another job may be creating this cache.
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pathogen-repo-ci (zika)
Failed to save: Unable to reserve cache with key 2025-10-10-linux-64-augur-args-30d39f4-root-dcc80ee-bin-d2edc1ba4d7ee2a8dabe8913906c08a42cf169bb65e50fc0d53a37b44e2bdd1e, another job may be creating this cache.
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pathogen-repo-ci-v0 (rsv)
Failed to save: Unable to reserve cache with key 2025-10-10-linux-64-augur-args-30d39f4-root-dcc80ee-bin-d2edc1ba4d7ee2a8dabe8913906c08a42cf169bb65e50fc0d53a37b44e2bdd1e, another job may be creating this cache.
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pathogen-repo-ci (mpox)
Failed to save: Unable to reserve cache with key 2025-10-10-linux-64-augur-args-30d39f4-root-dcc80ee-bin-d2edc1ba4d7ee2a8dabe8913906c08a42cf169bb65e50fc0d53a37b44e2bdd1e, another job may be creating this cache.
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pathogen-repo-ci (oropouche)
Failed to save: Unable to reserve cache with key 2025-10-10-linux-64-augur-args-30d39f4-root-dcc80ee-bin-d2edc1ba4d7ee2a8dabe8913906c08a42cf169bb65e50fc0d53a37b44e2bdd1e, another job may be creating this cache.
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pathogen-repo-ci (measles)
Failed to save: Unable to reserve cache with key 2025-10-10-linux-64-augur-args-30d39f4-root-dcc80ee-bin-d2edc1ba4d7ee2a8dabe8913906c08a42cf169bb65e50fc0d53a37b44e2bdd1e, another job may be creating this cache.
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pathogen-repo-ci (seasonal-cov)
Failed to save: Unable to reserve cache with key 2025-10-10-linux-64-augur-args-30d39f4-root-dcc80ee-bin-d2edc1ba4d7ee2a8dabe8913906c08a42cf169bb65e50fc0d53a37b44e2bdd1e, another job may be creating this cache.
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pathogen-repo-ci (yellow-fever)
Failed to save: Unable to reserve cache with key 2025-10-10-linux-64-augur-args-30d39f4-root-dcc80ee-bin-d2edc1ba4d7ee2a8dabe8913906c08a42cf169bb65e50fc0d53a37b44e2bdd1e, another job may be creating this cache.
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pathogen-repo-ci (lassa)
Failed to save: Unable to reserve cache with key 2025-10-10-linux-64-augur-args-30d39f4-root-dcc80ee-bin-d2edc1ba4d7ee2a8dabe8913906c08a42cf169bb65e50fc0d53a37b44e2bdd1e, another job may be creating this cache.
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pathogen-repo-ci (rabies)
Failed to save: Unable to reserve cache with key 2025-10-10-linux-64-augur-args-30d39f4-root-dcc80ee-bin-d2edc1ba4d7ee2a8dabe8913906c08a42cf169bb65e50fc0d53a37b44e2bdd1e, another job may be creating this cache.
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codecov
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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Artifacts
Produced during runtime
| Name | Size | Digest | |
|---|---|---|---|
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coverage
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189 KB |
sha256:62f97f81c5468a245c49d2258b13c8397dd9794078c2a23b917eb9aa2dc4980e
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output-avian-flu
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98.2 KB |
sha256:c88f6165821214e0fe24140efef45198a94ac645bf964920825a99af36ed4dd0
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output-dengue
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436 KB |
sha256:87cc7d360cfd18583961f0f611c3f39cde0232dc7486927449fad551345e7491
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output-lassa
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1.52 MB |
sha256:493d7fa0439eb8172ef9a6be3a07b2e2c992356b695bbd9afd71e651eef5e6b6
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output-measles
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3.9 MB |
sha256:33c00c9dd26c028dce7ed852235aa977936fd49266c6418d87f977f76e4e628d
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output-mpox
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14.4 MB |
sha256:03782617007e022b38327c14dd01b0f8fc784e0ece5b10fddfc782fa144deaa6
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output-mumps
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312 KB |
sha256:39d73096a4c1b1ee175c240771b9bc0a0fb68353959f8234b42b5bf9a99895f9
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output-ncov
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713 KB |
sha256:b97b197b1ce4a0ec3cb0053997324a5f5ab70f810b001d4a6df139e9be1078e8
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output-oropouche
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588 KB |
sha256:1cbfefe06c538b7ea886b606e50d29976b662d1cddc584686c7728e137ea8eb8
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output-rabies
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5.27 MB |
sha256:e658e08e64a66f3f8e1344168d7237b3997ee03e072a153da2ddaba96eae30f7
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output-rsv
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1.2 MB |
sha256:4b484d272e1596c566baa0d6b64b407a0030f3aa6a7c0157076f0b0c259b9eec
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output-seasonal-cov
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2.45 MB |
sha256:5af85a288aa84c3ce1e793fd0526677e8c5f0533fc249ba205f1e22052a01914
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output-seasonal-flu
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60.3 KB |
sha256:c9e7a68fb330b8b4649dbae14fe58a8638a4746d9face9963b38010bb04fed2c
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output-tb
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5.03 MB |
sha256:2da6d2a4d02d6ad6e7a4fb5301506fdf111b8ea5ca8e47c92b07a6a2d7fe37d7
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output-wnv
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241 KB |
sha256:41542ae293b8844e80201602a23854c5dfa527d0fd6eacec5031a93ec53ba08e
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output-yellow-fever
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2.13 MB |
sha256:44c23f2466cd396405423327638119cf73e9fb2d6edd450f388dc10713885956
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output-zika
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807 KB |
sha256:901410ebd2de633e55bf786760dabde25017bb8b5de485dd678ccf30d9992fc6
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