CI #3972
corneliusroemerci.yaml
on: schedule
Matrix: pytest-cram
mypy
53s
pyright
23s
build-docs
/
build
1m 10s
check-docs
42s
check-subsample-config-schema
42s
Matrix: pathogen-repo-ci-v0
Matrix: pathogen-repo-ci
codecov
14s
rebuild-docker-image
Annotations
1 error and 19 warnings
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build-docs / build
Process completed with exit code 2.
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pyright
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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check-subsample-config-schema
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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mypy
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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pathogen-repo-ci-v0 (avian-flu)
Failed to save: Unable to reserve cache with key 2025-10-12-linux-64-augur-args-30d39f4-root-dcc80ee-bin-d2edc1ba4d7ee2a8dabe8913906c08a42cf169bb65e50fc0d53a37b44e2bdd1e, another job may be creating this cache.
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pathogen-repo-ci (mumps)
Failed to save: Unable to reserve cache with key 2025-10-12-linux-64-augur-args-30d39f4-root-dcc80ee-bin-d2edc1ba4d7ee2a8dabe8913906c08a42cf169bb65e50fc0d53a37b44e2bdd1e, another job may be creating this cache.
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pathogen-repo-ci-v0 (ncov)
Failed to save: Unable to reserve cache with key 2025-10-12-linux-64-augur-args-30d39f4-root-dcc80ee-bin-d2edc1ba4d7ee2a8dabe8913906c08a42cf169bb65e50fc0d53a37b44e2bdd1e, another job may be creating this cache.
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pathogen-repo-ci-v0 (seasonal-flu)
Failed to save: Unable to reserve cache with key 2025-10-12-linux-64-augur-args-30d39f4-root-dcc80ee-bin-d2edc1ba4d7ee2a8dabe8913906c08a42cf169bb65e50fc0d53a37b44e2bdd1e, another job may be creating this cache.
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pathogen-repo-ci-v0 (rsv)
Failed to save: Unable to reserve cache with key 2025-10-12-linux-64-augur-args-30d39f4-root-dcc80ee-bin-d2edc1ba4d7ee2a8dabe8913906c08a42cf169bb65e50fc0d53a37b44e2bdd1e, another job may be creating this cache.
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pathogen-repo-ci (wnv)
Failed to save: Unable to reserve cache with key 2025-10-12-linux-64-augur-args-30d39f4-root-dcc80ee-bin-d2edc1ba4d7ee2a8dabe8913906c08a42cf169bb65e50fc0d53a37b44e2bdd1e, another job may be creating this cache.
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pathogen-repo-ci-v0 (tb)
Failed to save: Unable to reserve cache with key 2025-10-12-linux-64-augur-args-30d39f4-root-dcc80ee-bin-d2edc1ba4d7ee2a8dabe8913906c08a42cf169bb65e50fc0d53a37b44e2bdd1e, another job may be creating this cache.
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pathogen-repo-ci (zika)
Failed to save: Unable to reserve cache with key 2025-10-12-linux-64-augur-args-30d39f4-root-dcc80ee-bin-d2edc1ba4d7ee2a8dabe8913906c08a42cf169bb65e50fc0d53a37b44e2bdd1e, another job may be creating this cache.
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pathogen-repo-ci (dengue)
Failed to save: Unable to reserve cache with key 2025-10-12-linux-64-augur-args-30d39f4-root-dcc80ee-bin-d2edc1ba4d7ee2a8dabe8913906c08a42cf169bb65e50fc0d53a37b44e2bdd1e, another job may be creating this cache.
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pathogen-repo-ci (measles)
Failed to save: Unable to reserve cache with key 2025-10-12-linux-64-augur-args-30d39f4-root-dcc80ee-bin-d2edc1ba4d7ee2a8dabe8913906c08a42cf169bb65e50fc0d53a37b44e2bdd1e, another job may be creating this cache.
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pathogen-repo-ci (oropouche)
Failed to save: Unable to reserve cache with key 2025-10-12-linux-64-augur-args-30d39f4-root-dcc80ee-bin-d2edc1ba4d7ee2a8dabe8913906c08a42cf169bb65e50fc0d53a37b44e2bdd1e, another job may be creating this cache.
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pathogen-repo-ci (seasonal-cov)
Failed to save: Unable to reserve cache with key 2025-10-12-linux-64-augur-args-30d39f4-root-dcc80ee-bin-d2edc1ba4d7ee2a8dabe8913906c08a42cf169bb65e50fc0d53a37b44e2bdd1e, another job may be creating this cache.
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pathogen-repo-ci (yellow-fever)
Failed to save: Unable to reserve cache with key 2025-10-12-linux-64-augur-args-30d39f4-root-dcc80ee-bin-d2edc1ba4d7ee2a8dabe8913906c08a42cf169bb65e50fc0d53a37b44e2bdd1e, another job may be creating this cache.
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pathogen-repo-ci (rabies)
Failed to save: Unable to reserve cache with key 2025-10-12-linux-64-augur-args-30d39f4-root-dcc80ee-bin-d2edc1ba4d7ee2a8dabe8913906c08a42cf169bb65e50fc0d53a37b44e2bdd1e, another job may be creating this cache.
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pathogen-repo-ci (lassa)
Failed to save: Unable to reserve cache with key 2025-10-12-linux-64-augur-args-30d39f4-root-dcc80ee-bin-d2edc1ba4d7ee2a8dabe8913906c08a42cf169bb65e50fc0d53a37b44e2bdd1e, another job may be creating this cache.
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codecov
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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Artifacts
Produced during runtime
| Name | Size | Digest | |
|---|---|---|---|
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coverage
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189 KB |
sha256:7b5b8ff4f52e4448547d01b7ceeda611dd4093d513f1ea783690c844723d7b91
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output-avian-flu
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98.3 KB |
sha256:bab926f76b5b487515daaa890da05684eff953d1d5495e300c08c32899082001
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output-dengue
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436 KB |
sha256:29fcc760165b4f1938d216d23d312b7f89e3fc68a97c85a782fa6337494df1e8
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output-lassa
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1.52 MB |
sha256:37ef39079aad79b73053cf45261fb58a7195f4785e381f4fd5747b83d0276fdf
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output-measles
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3.92 MB |
sha256:ef8e5437464aa2de0e1af543ea9b10f2ed05f54095ccfe3e88390f6432c713f4
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output-mpox
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14.4 MB |
sha256:426b874effd78dd56d7be2c8a12921f9b5a667ebc727f2c956944f482257aa13
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output-mumps
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310 KB |
sha256:a0ba1bac3285fb6578340ae12e035ad07f0db3d5d4c4b7c148db70679f3c539b
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output-ncov
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716 KB |
sha256:f4e04e763f81d5af9c84e7e1540b0106ba7cdfce106bd95f9e9c886366dd9b6a
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output-oropouche
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588 KB |
sha256:175f49072c0009244c9aad5669d3dd9a9c5a8750cf575f71afc58a2788271b1a
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output-rabies
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5.27 MB |
sha256:e3fdd7e308126e45f430485f5f6378819e3bffa2ea35ba5f8c51396edeeaafb8
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output-rsv
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1.2 MB |
sha256:07d5cbcda6533024092633dae9902be60ed108a022b08b6dedb6ae79fd53e40b
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output-seasonal-cov
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2.45 MB |
sha256:d445bce214aabd19fcab64e18c9bf60b365f0e841859d688ee2b5b4a1df27c38
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output-seasonal-flu
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60.3 KB |
sha256:e32e5c8e2813c633871830e37caeaffd40ad2923f093b8793a4bc9345cb6d5f2
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output-tb
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5.03 MB |
sha256:5747cf262adbe2950b3c68061f788b71fce8938600d099eae98ecc815340ebb3
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output-wnv
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242 KB |
sha256:8467c5ff29d50e82e1e3297f1bf72ee61c5b909f97fd4977c5b671f76ff15ec5
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output-yellow-fever
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2.12 MB |
sha256:a16c405e0f0f9a1ef985d4902b9e28663eddb6679b4cd32c9dbe2bf4bd8af264
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output-zika
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808 KB |
sha256:2e311c552d55107a57faa4f7aac1005cd4707d0a285e9c11b0249aad6640589e
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