docs: Fix typing.Union warning #3973
joverlee521ci.yaml
on: pull_request
Matrix: pytest-cram
mypy
52s
pyright
24s
build-docs
/
build
1m 23s
check-docs
42s
check-subsample-config-schema
45s
Matrix: pathogen-repo-ci-v0
Matrix: pathogen-repo-ci
codecov
19s
rebuild-docker-image
Annotations
19 warnings
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pyright
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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check-subsample-config-schema
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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mypy
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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pathogen-repo-ci-v0 (avian-flu)
Failed to save: Unable to reserve cache with key 2025-10-13-linux-64-augur-args-30d39f4-root-dcc80ee-bin-d2edc1ba4d7ee2a8dabe8913906c08a42cf169bb65e50fc0d53a37b44e2bdd1e, another job may be creating this cache.
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pathogen-repo-ci (mumps)
Failed to save: Unable to reserve cache with key 2025-10-13-linux-64-augur-args-30d39f4-root-dcc80ee-bin-d2edc1ba4d7ee2a8dabe8913906c08a42cf169bb65e50fc0d53a37b44e2bdd1e, another job may be creating this cache.
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pathogen-repo-ci-v0 (seasonal-flu)
Failed to save: Unable to reserve cache with key 2025-10-13-linux-64-augur-args-30d39f4-root-dcc80ee-bin-d2edc1ba4d7ee2a8dabe8913906c08a42cf169bb65e50fc0d53a37b44e2bdd1e, another job may be creating this cache.
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pathogen-repo-ci-v0 (ncov)
Failed to save: Unable to reserve cache with key 2025-10-13-linux-64-augur-args-30d39f4-root-dcc80ee-bin-d2edc1ba4d7ee2a8dabe8913906c08a42cf169bb65e50fc0d53a37b44e2bdd1e, another job may be creating this cache.
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pathogen-repo-ci (wnv)
Failed to save: Unable to reserve cache with key 2025-10-13-linux-64-augur-args-30d39f4-root-dcc80ee-bin-d2edc1ba4d7ee2a8dabe8913906c08a42cf169bb65e50fc0d53a37b44e2bdd1e, another job may be creating this cache.
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pathogen-repo-ci-v0 (rsv)
Failed to save: Unable to reserve cache with key 2025-10-13-linux-64-augur-args-30d39f4-root-dcc80ee-bin-d2edc1ba4d7ee2a8dabe8913906c08a42cf169bb65e50fc0d53a37b44e2bdd1e, another job may be creating this cache.
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pathogen-repo-ci (dengue)
Failed to save: Unable to reserve cache with key 2025-10-13-linux-64-augur-args-30d39f4-root-dcc80ee-bin-d2edc1ba4d7ee2a8dabe8913906c08a42cf169bb65e50fc0d53a37b44e2bdd1e, another job may be creating this cache.
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pathogen-repo-ci-v0 (tb)
Failed to save: Unable to reserve cache with key 2025-10-13-linux-64-augur-args-30d39f4-root-dcc80ee-bin-d2edc1ba4d7ee2a8dabe8913906c08a42cf169bb65e50fc0d53a37b44e2bdd1e, another job may be creating this cache.
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pathogen-repo-ci (mpox)
Failed to save: Unable to reserve cache with key 2025-10-13-linux-64-augur-args-30d39f4-root-dcc80ee-bin-d2edc1ba4d7ee2a8dabe8913906c08a42cf169bb65e50fc0d53a37b44e2bdd1e, another job may be creating this cache.
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pathogen-repo-ci (zika)
Failed to save: Unable to reserve cache with key 2025-10-13-linux-64-augur-args-30d39f4-root-dcc80ee-bin-d2edc1ba4d7ee2a8dabe8913906c08a42cf169bb65e50fc0d53a37b44e2bdd1e, another job may be creating this cache.
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pathogen-repo-ci (measles)
Failed to save: Unable to reserve cache with key 2025-10-13-linux-64-augur-args-30d39f4-root-dcc80ee-bin-d2edc1ba4d7ee2a8dabe8913906c08a42cf169bb65e50fc0d53a37b44e2bdd1e, another job may be creating this cache.
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pathogen-repo-ci (oropouche)
Failed to save: Unable to reserve cache with key 2025-10-13-linux-64-augur-args-30d39f4-root-dcc80ee-bin-d2edc1ba4d7ee2a8dabe8913906c08a42cf169bb65e50fc0d53a37b44e2bdd1e, another job may be creating this cache.
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pathogen-repo-ci (yellow-fever)
Failed to save: Unable to reserve cache with key 2025-10-13-linux-64-augur-args-30d39f4-root-dcc80ee-bin-d2edc1ba4d7ee2a8dabe8913906c08a42cf169bb65e50fc0d53a37b44e2bdd1e, another job may be creating this cache.
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pathogen-repo-ci (lassa)
Failed to save: Unable to reserve cache with key 2025-10-13-linux-64-augur-args-30d39f4-root-dcc80ee-bin-d2edc1ba4d7ee2a8dabe8913906c08a42cf169bb65e50fc0d53a37b44e2bdd1e, another job may be creating this cache.
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pathogen-repo-ci (rabies)
Failed to save: Unable to reserve cache with key 2025-10-13-linux-64-augur-args-30d39f4-root-dcc80ee-bin-d2edc1ba4d7ee2a8dabe8913906c08a42cf169bb65e50fc0d53a37b44e2bdd1e, another job may be creating this cache.
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codecov
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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Artifacts
Produced during runtime
| Name | Size | Digest | |
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coverage
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189 KB |
sha256:5b8920ddcaf4c137fc1b9221f316dfa3dd0876e8e9e8d260558220a06b2707cf
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output-avian-flu
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98.2 KB |
sha256:aa3ed72100b0c43d90668cc86c8df890711206f0d58fbc9eacf524c730e2bf79
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output-dengue
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436 KB |
sha256:9b4e3747d56a958d42f21ca14624bdd68b24e4cb471de83f4935a55db3c63d46
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output-lassa
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1.52 MB |
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output-measles
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3.92 MB |
sha256:89024837728eeb05837e69d12e2b0180c9588a6a176c2dff4be8730a2b2f1d08
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output-mpox
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14.4 MB |
sha256:cdf513b4a5635855cada98e4425884268caabfb1da955ee66080a6790c51debf
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output-mumps
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310 KB |
sha256:582a93550e2ec4a4a924559eaf02664afb1d30bcbb64fe95d389f232e971d5f2
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output-ncov
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717 KB |
sha256:20e84e3d660f0d914db54dd7c53782e159d6cd6c9a5bb25884c682fc2334e8fb
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output-oropouche
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588 KB |
sha256:46c54854f9c57433c8b31844c6c12d65cc71739e4e448154dab8776e6a8bd1a8
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output-rabies
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5.27 MB |
sha256:785a7110a972cc558319a14b16d1d46a8f9ac13ac5af6c6f148155efaf22cecd
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output-rsv
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1.2 MB |
sha256:fc551965b2ae7120d1c2d7e3a702046b457448c98ae969e4fc0b53d3107b0e7d
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output-seasonal-cov
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2.49 MB |
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output-seasonal-flu
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60.3 KB |
sha256:1ffde9f2b2bec514dfa1149c20b18fdb855867d55b626413d4d4de5db881d02a
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output-tb
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5.03 MB |
sha256:1721b509a6525cd370cbdeb9b90af11090fa784e1e24fa714040a2c372b6134b
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output-wnv
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241 KB |
sha256:ffdfcec220be247a25b00227baf64078bfe5bad1d1355e62af01e425d2beae95
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output-yellow-fever
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2.13 MB |
sha256:6304f5bd1e4d126b1f774ffa09933cfdc18d0e4afcb955a354603544e31c88c1
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output-zika
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807 KB |
sha256:79ee31342fa8c35530fbafdac83e83298d6e1951697cebe627daecc290a35e45
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