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translate: Error when translating sequence lengths indivisible by 3 #3985

translate: Error when translating sequence lengths indivisible by 3

translate: Error when translating sequence lengths indivisible by 3 #3985

Triggered via pull request October 13, 2025 23:38
Status Failure
Total duration 7m 22s
Artifacts 16

ci.yaml

on: pull_request
Matrix: pytest-cram
Matrix: pathogen-repo-ci-v0
Matrix: pathogen-repo-ci
rebuild-docker-image
0s
rebuild-docker-image
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21 errors and 3 warnings
test (python=3.9 biopython=1.80 numpy=latest)
The strategy configuration was canceled because "pytest-cram._3_11_1_82" failed
test (python=3.12 biopython=latest numpy=latest)
The strategy configuration was canceled because "pytest-cram._3_11_1_82" failed
test (python=3.11 biopython=1.82 numpy=latest)
Process completed with exit code 1.
test (python=3.10 biopython=1.82 numpy=latest)
The strategy configuration was canceled because "pytest-cram._3_11_1_82" failed
test (python=3.9 biopython=1.85 numpy=latest)
The strategy configuration was canceled because "pytest-cram._3_11_1_82" failed
test (python=3.9 biopython=1.82 numpy=latest)
The strategy configuration was canceled because "pytest-cram._3_11_1_82" failed
test (python=3.13 biopython=latest numpy=latest)
The strategy configuration was canceled because "pytest-cram._3_11_1_82" failed
test (python=3.12 biopython=1.82 numpy=latest)
The strategy configuration was canceled because "pytest-cram._3_11_1_82" failed
test (python=3.13 biopython=1.85 numpy=latest)
The strategy configuration was canceled because "pytest-cram._3_11_1_82" failed
test (python=3.12 biopython=1.85 numpy=latest)
The strategy configuration was canceled because "pytest-cram._3_11_1_82" failed
test (python=3.10 biopython=1.80 numpy=1.26.4)
The strategy configuration was canceled because "pytest-cram._3_11_1_82" failed
test (python=3.12 biopython=latest numpy=1.26.4)
The strategy configuration was canceled because "pytest-cram._3_11_1_82" failed
test (python=3.11 biopython=1.80 numpy=latest)
The strategy configuration was canceled because "pytest-cram._3_11_1_82" failed
test (python=3.11 biopython=1.85 numpy=latest)
The strategy configuration was canceled because "pytest-cram._3_11_1_82" failed
test (python=3.10 biopython=1.85 numpy=latest)
The strategy configuration was canceled because "pytest-cram._3_11_1_82" failed
test (python=3.11 biopython=latest numpy=latest)
The strategy configuration was canceled because "pytest-cram._3_11_1_82" failed
test (python=3.10 biopython=latest numpy=latest)
Process completed with exit code 1.
test (python=3.10 biopython=latest numpy=latest)
The strategy configuration was canceled because "pytest-cram._3_11_1_82" failed
test (python=3.10 biopython=1.80 numpy=latest)
The operation was canceled.
test (python=3.10 biopython=1.80 numpy=latest)
The strategy configuration was canceled because "pytest-cram._3_11_1_82" failed
build-docs / build
Process completed with exit code 2.
pyright
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
mypy
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
check-subsample-config-schema
The `python-version` input is not set. The version of Python currently in `PATH` will be used.

Artifacts

Produced during runtime
Name Size Digest
output-avian-flu
98.3 KB
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output-dengue
436 KB
sha256:333066033a9dec1c1e30b175f064d0df647c4d928f2fee63c63d7f938592899f
output-lassa
1.52 MB
sha256:2f5276205961195c10ae260c1cf835ef2aec3d418941bb950a5df5fde4c2990a
output-measles
3.91 MB
sha256:b8aac7e2a78bf6f6ca8c6b1af438aaac1882198886a24705217e1cadcaaeef94
output-mpox
14.4 MB
sha256:d3cbac2602385ff5038c9738c64bb82529995a636561815e3ce2cdd33960422d
output-mumps
379 KB
sha256:366506005d1025bbbd8e3e4eab46a2ca3c4a044e1a48485432bbdc93a22b3fd5
output-ncov
714 KB
sha256:61eba74db1fb3affbf4a77ad04bdc3a039bc9aa8d2f12d1cc9e82a8276802ea2
output-oropouche
588 KB
sha256:18869cdd79c326298edd115e6bdbad2e75131bd21c6899b3a3ed7c5207b7dd12
output-rabies
5.27 MB
sha256:e60a0ad35dd6cc85f80d79867ec0bc3a0bff011ec97d695c7654a1ef2e205036
output-rsv
1.2 MB
sha256:0df444afcd7d325af88e09e135b950e74f8b5bd0f0e6f2797a47ca4ee2ae8bd4
output-seasonal-cov
2.47 MB
sha256:35098a77c986e3b59f8f5e521f5d38821b93f41814ecdfc35b3486e51ed789d8
output-seasonal-flu
60.3 KB
sha256:3ad23f981e948c9a3331acc7ed99981963811e608eefc5c13ee6cb62c861ae79
output-tb
5.03 MB
sha256:40e5dd1eb3e41bf60edbe17112f5d14588d7e95c5f78ef8b6d0a6851be884cc0
output-wnv
240 KB
sha256:74c5b4e562d51d31a22104e4da3c92dc6e72f0f363ba40f213197e2cd23c1aa0
output-yellow-fever
2.13 MB
sha256:9979c4dc0bd50bc599c4d8a64f62f9f607fc151023ffd9cdef711195fa239dd4
output-zika
807 KB
sha256:cfb3bd58aaeed0a7f6edc4928791b176ee76de989844e32f4e30ed5685c75dcf