CI #4008
corneliusroemerci.yaml
on: schedule
Matrix: pytest-cram
mypy
49s
pyright
17s
build-docs
/
build
1m 39s
check-docs
43s
check-subsample-config-schema
46s
Matrix: pathogen-repo-ci-v0
Matrix: pathogen-repo-ci
codecov
13s
rebuild-docker-image
0s
Annotations
19 warnings
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pyright
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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mypy
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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check-subsample-config-schema
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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pathogen-repo-ci-v0 (avian-flu)
Failed to save: Unable to reserve cache with key 2025-10-23-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (mumps)
Failed to save: Unable to reserve cache with key 2025-10-23-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci-v0 (ncov)
Failed to save: Unable to reserve cache with key 2025-10-23-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (wnv)
Failed to save: Unable to reserve cache with key 2025-10-23-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci-v0 (seasonal-flu)
Failed to save: Unable to reserve cache with key 2025-10-23-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci-v0 (rsv)
Failed to save: Unable to reserve cache with key 2025-10-23-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci-v0 (vcf-input-tutorial)
Failed to save: Unable to reserve cache with key 2025-10-23-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (dengue)
Failed to save: Unable to reserve cache with key 2025-10-23-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (measles)
Failed to save: Unable to reserve cache with key 2025-10-23-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (mpox)
Failed to save: Unable to reserve cache with key 2025-10-23-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (oropouche)
Failed to save: Unable to reserve cache with key 2025-10-23-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (seasonal-cov)
Failed to save: Unable to reserve cache with key 2025-10-23-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (yellow-fever)
Failed to save: Unable to reserve cache with key 2025-10-23-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (lassa)
Failed to save: Unable to reserve cache with key 2025-10-23-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (rabies)
Failed to save: Unable to reserve cache with key 2025-10-23-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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codecov
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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Artifacts
Produced during runtime
| Name | Size | Digest | |
|---|---|---|---|
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coverage
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191 KB |
sha256:9f50f4e4a9963cf8b00e57a1d87531c014ff88d9efac8e5966e1195e4fb93b77
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output-avian-flu
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98.2 KB |
sha256:8b4e3021a97f3fc6f7417299412f8d09e70c35a1ba71b24b86b2d78bc20e6d7b
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output-dengue
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436 KB |
sha256:a3c0a213abca66b90500da692584407c751b263f9d43d5660b8e227e688f91fd
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output-lassa
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1.52 MB |
sha256:d7c88c881a0379a7c7860c80403f74ed6d84c28a53605c5e596b28f29c3a32fa
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output-measles
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3.9 MB |
sha256:a7d1ae69f937a0d2440e72ee40f74f1fc0e32769141dba388b52afc7ae8fcd2d
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output-mpox
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14.4 MB |
sha256:735e5aa32430c00fdd257552d64e50474c61c330ebbb77e0c149a05ee7711f39
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output-mumps
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378 KB |
sha256:f0b5919c4eb8a72bc476855f503a8b2e24ec18e7cbb52c8fb1f3dc5485dd7628
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output-ncov
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712 KB |
sha256:ffbecce9d4448c4af1ae2fadf69ef2bfd05e23aee4177be15b0863ac277b8d24
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output-oropouche
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588 KB |
sha256:378afbe39718943b262d83d77b9f3eaaf95858b014e3e3c253c0bbf60a84387f
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output-rabies
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5.28 MB |
sha256:947930fddcf64116a20651ff24f01ce88f27894abef38c615153f5c2f705dc23
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output-rsv
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1.2 MB |
sha256:54d3b1e3428a3d8f6a13977b9394df627565ce2760af46758d0a4aa7e7b57cef
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output-seasonal-cov
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2.46 MB |
sha256:d104e19d073d49e7f5bc832309d252ef4cd564b4450055c63a3e5896c7d8c441
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output-seasonal-flu
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60.3 KB |
sha256:faa6c77b8ee1c5a93085df4a0efaabaaba598c672583cb49d2f01964f844dc1b
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output-vcf-input-tutorial
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5.03 MB |
sha256:d8beb8260c972b5361854b915a768ad03ef75926f078aa2d22a81d058d8a2a15
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output-wnv
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241 KB |
sha256:c00413f29f5a8b32563687777c51a53246ed1e66baf02e58a3195953d0f6c16c
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output-yellow-fever
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2.14 MB |
sha256:35b0514196d5886ee6dd176b09a36ecd816bc4b278b7c2482db0248bf94b20b5
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output-zika
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807 KB |
sha256:fc032a2abe7482ae487000d7552e87654f6a486561565141f95087d55e74b7fd
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