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fix(filter): allow --include/exclude-where for columns in --metadata-id-columns #4014

fix(filter): allow --include/exclude-where for columns in --metadata-id-columns

fix(filter): allow --include/exclude-where for columns in --metadata-id-columns #4014

Triggered via pull request October 24, 2025 14:13
Status Success
Total duration 33m 41s
Artifacts 17

ci.yaml

on: pull_request
Matrix: pytest-cram
Matrix: pathogen-repo-ci-v0
Matrix: pathogen-repo-ci
rebuild-docker-image
0s
rebuild-docker-image
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4 warnings
pyright
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
mypy
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
check-subsample-config-schema
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
codecov
The `python-version` input is not set. The version of Python currently in `PATH` will be used.

Artifacts

Produced during runtime
Name Size Digest
coverage
191 KB
sha256:7b8d48721b82c54c9606ef1d6bbbb398b687a9f52e2e7f182e0184dac698091d
output-avian-flu
98.3 KB
sha256:f31a7c0bf2dc569d06a855eaf7a7f4d9faaf91171154835c9fb24ce9fe209f53
output-dengue
436 KB
sha256:e8f45b6e668faa6b1295fdb1b8d76a891e6a367e8da47c1e98caee6a14889957
output-lassa
370 KB
sha256:1455e4cf24afc384df5507c127b3b08c97243f70b0eb0678d57b97fa3606bb7c
output-measles
3.9 MB
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output-mpox
14.4 MB
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output-mumps
378 KB
sha256:a033b7e2a93427a3fdcd3b4cedf8c50c9f98d5dad1fcb9bc4a70333350ebf05e
output-ncov
717 KB
sha256:f0efc50ed8bf7402eb2e1c211968394df353edce2ed773682fc2d90b12d061e6
output-oropouche
588 KB
sha256:5a141643181708c7ae54064a6bb736009eba6dcd8eacaee1c9c100cb93111e5c
output-rabies
5.28 MB
sha256:5f995391206bd567df14001346f12aa16d0c991b8db4eb47492e606d801c914f
output-rsv
1.2 MB
sha256:fe68055bf36bbcd00ba78f9b2116a72499642fe7b6cbdca08c5b49909b19e05e
output-seasonal-cov
2.45 MB
sha256:5b91ecc06e34cada499276c70be70c9d70b8b8b3048c909852e8b034e40efe23
output-seasonal-flu
60.4 KB
sha256:f10c21b817205c9d9adb0625016e45f0ee8f508c9dce379dc3c47a10f2503dcc
output-vcf-input-tutorial
5.03 MB
sha256:42853bd39156102308d9a1d43a0e045811b264461709700cd82f3727ae3324bf
output-wnv
241 KB
sha256:dc69d7c434f4409e6a5edb7d0a47d439994f86315e5af76dc4adcd9815a7101a
output-yellow-fever
2.12 MB
sha256:4c97db407c7c6e874b8be4c9bd5b83a0d0c3631c534a7da7361b18d168d2d634
output-zika
807 KB
sha256:e232362f0971bb9f361599ca421f8894e391b76c3a43c3e2fb6b8fc7e1d4c20a