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fix(filter): allow --include/exclude-where for columns in --metadata-id-columns #4015

fix(filter): allow --include/exclude-where for columns in --metadata-id-columns

fix(filter): allow --include/exclude-where for columns in --metadata-id-columns #4015

Triggered via pull request October 24, 2025 14:24
Status Success
Total duration 34m 3s
Artifacts 17

ci.yaml

on: pull_request
Matrix: pytest-cram
Matrix: pathogen-repo-ci-v0
Matrix: pathogen-repo-ci
rebuild-docker-image
0s
rebuild-docker-image
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4 warnings
mypy
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
check-subsample-config-schema
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
pyright
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
codecov
The `python-version` input is not set. The version of Python currently in `PATH` will be used.

Artifacts

Produced during runtime
Name Size Digest
coverage
191 KB
sha256:d6509c1c3c57bb409163e7c6de26c13aee98396ba5fc210a20acda6f878976bc
output-avian-flu
98.3 KB
sha256:d00a1ecd8468547d88c3284f1e9a48e12170d3f545afeef91b9da0cdeda90c97
output-dengue
436 KB
sha256:a7214aeccd4c6b5be9c7b6185b08e7255ba4928ebf5f9230851f3c3d6a6a6884
output-lassa
369 KB
sha256:66f7a345de91c52ec6709c30b830d3fdad16b4066f6a080121803244b3a6bfe8
output-measles
3.91 MB
sha256:ad8b2be66a25f29350b9d9d8b60b02c64e803f1d719111362e7227a9e42c35a3
output-mpox
14.4 MB
sha256:25b0228bf9dd4d3a631d9880c60a020fa58cb3e62b2e66852a6c5384de70c925
output-mumps
378 KB
sha256:dce92d87226b9e4808d839dd43b4b7e8722b3c0a0070f9940811d1e2cb2bad17
output-ncov
712 KB
sha256:dd2b74d0c44ebd668b8bb00c40a37bfa6e9aad38d204858a3d9c25c5ab16e89a
output-oropouche
588 KB
sha256:0ffd0fc003b6c20ea58a65c98043ef3744db21130e0bdc101db02ebf271cbce2
output-rabies
5.28 MB
sha256:f3854597d97d0318c95d6dd7f68aa5e4779a3266cf50da3dfb89e16fc1d53d3e
output-rsv
1.2 MB
sha256:513f28f762cffdbf166ff73f4d36f64b34a1b07d945d7b174b0b10e709c87d12
output-seasonal-cov
2.46 MB
sha256:41bed1fcb27478a02c5af32f2bb2688d7b97662472356ced53192b91bdadc572
output-seasonal-flu
60.4 KB
sha256:f7705e6087a76c3089234eba04007429a21e44e66715195d04105906807d6aee
output-vcf-input-tutorial
5.03 MB
sha256:3ff11a98ff6a5bb1c1818b6d7c66fe6386ccd5f72fda887cafdbd8e9ffe92dea
output-wnv
241 KB
sha256:e0d5060f6d14426121dfc70f29f1f64786046b51029bf068b6bda54ac181d38f
output-yellow-fever
2.13 MB
sha256:4bdf78eaacf2cc685148f3577af0381de40d682834019ff7b7aea15bc35202fe
output-zika
807 KB
sha256:7b5852c83efa1319ec2d6faadf4609506a2149da72bf4310893de45d88cb73c7