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fix(filter): allow --include/exclude-where for columns in --metadata-id-columns #4016

fix(filter): allow --include/exclude-where for columns in --metadata-id-columns

fix(filter): allow --include/exclude-where for columns in --metadata-id-columns #4016

Triggered via pull request October 24, 2025 14:25
Status Success
Total duration 37m 27s
Artifacts 17

ci.yaml

on: pull_request
Matrix: pytest-cram
Matrix: pathogen-repo-ci-v0
Matrix: pathogen-repo-ci
rebuild-docker-image
0s
rebuild-docker-image
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4 warnings
pyright
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
mypy
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
check-subsample-config-schema
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
codecov
The `python-version` input is not set. The version of Python currently in `PATH` will be used.

Artifacts

Produced during runtime
Name Size Digest
coverage
191 KB
sha256:3a1dc15664fe37d5cde5d853d26687d83953020446cd1a3f946eb23f9404d93b
output-avian-flu
98.3 KB
sha256:d82c8939cae8114842f7acb0a0334ea8110e0541d43a0907bfd200efadf0f30b
output-dengue
436 KB
sha256:1c718df1900b2c9f6990a75a59bbaed436a67ffa09b7d0be072805735091a96a
output-lassa
369 KB
sha256:f2c434e281146bf4ff68bbc1e32d0f6b342c9892c04c6b7353d4f0cab7a066f3
output-measles
3.91 MB
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output-mpox
14.4 MB
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output-mumps
378 KB
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output-ncov
716 KB
sha256:7071b303b7202e7f3c1e895df11c7ce218ce3db8ab8261c96e96e5ce251eb868
output-oropouche
588 KB
sha256:7766976fc2eabb3ecefcd738e2245c733ae62d3b4962ba19c1143d0558fac6d9
output-rabies
5.28 MB
sha256:f1d57e70d572e30344007d2fb72f5c6d01eb3e8fda107ca2b99ba29b0d1d6946
output-rsv
1.2 MB
sha256:7c2bfaf808ad9617d074f1f225b7238ebb8c9c32da8d90ffab1c80012bd44096
output-seasonal-cov
2.46 MB
sha256:ad7b625d9729820bcbaa0a4373e4a0e3d460caebc1f6c06d1c9b110d9b15ba98
output-seasonal-flu
60.3 KB
sha256:584438265747960bb8609b944dedbce634d9f559ba85da831a715b59ad7961d5
output-vcf-input-tutorial
5.03 MB
sha256:ded789f01014f17882cb3a82adf26a60bd32c519dbd8ab9b0e7a57714942bb7d
output-wnv
241 KB
sha256:e1707b7b4568fe8df26aa6db514e157f8f0d9df682e1f5613b26bc9c46154f14
output-yellow-fever
2.12 MB
sha256:939be358af39ae956a29e04c3b2e30f4fe2d155f21284852cf7d729fde291a0d
output-zika
807 KB
sha256:53f96d842ed7f87134bf17f1490ab4e07a6fc5798ee90dbd3504fbea93aea415