CI #4028
corneliusroemerci.yaml
on: schedule
Matrix: pytest-cram
mypy
57s
pyright
26s
build-docs
/
build
1m 30s
check-docs
56s
check-subsample-config-schema
46s
Matrix: pathogen-repo-ci-v0
Matrix: pathogen-repo-ci
codecov
18s
rebuild-docker-image
Annotations
19 warnings
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pyright
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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check-subsample-config-schema
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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mypy
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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pathogen-repo-ci-v0 (ncov)
Failed to save: Unable to reserve cache with key 2025-10-25-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci-v0 (avian-flu)
Failed to save: Unable to reserve cache with key 2025-10-25-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (mumps)
Failed to save: Unable to reserve cache with key 2025-10-25-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci-v0 (seasonal-flu)
Failed to save: Unable to reserve cache with key 2025-10-25-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (wnv)
Failed to save: Unable to reserve cache with key 2025-10-25-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci-v0 (rsv)
Failed to save: Unable to reserve cache with key 2025-10-25-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (dengue)
Failed to save: Unable to reserve cache with key 2025-10-25-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci-v0 (vcf-input-tutorial)
Failed to save: Unable to reserve cache with key 2025-10-25-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (zika)
Failed to save: Unable to reserve cache with key 2025-10-25-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (mpox)
Failed to save: Unable to reserve cache with key 2025-10-25-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (measles)
Failed to save: Unable to reserve cache with key 2025-10-25-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (oropouche)
Failed to save: Unable to reserve cache with key 2025-10-25-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (seasonal-cov)
Failed to save: Unable to reserve cache with key 2025-10-25-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (yellow-fever)
Failed to save: Unable to reserve cache with key 2025-10-25-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (rabies)
Failed to save: Unable to reserve cache with key 2025-10-25-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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codecov
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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Artifacts
Produced during runtime
| Name | Size | Digest | |
|---|---|---|---|
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coverage
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191 KB |
sha256:0450335e4fe73dea9a91e1c1b311a7a780b47ab25811865b3c5d160dd8a6a898
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output-avian-flu
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98.3 KB |
sha256:0e48f2a3331241fedd464f5a60b8726d7ba63ec2ef450c42fbcb27a6a548f120
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output-dengue
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436 KB |
sha256:52bef04ef2e7cece85530a2d5d99e503ff1da6036b45ba430ddf194a4e3f34d8
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output-lassa
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370 KB |
sha256:63ce3c1d95719718f6db9f05b197b19dbfb21663bbfa23dff9b9ec645f037f2a
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output-measles
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3.9 MB |
sha256:bff1cb04768c66796a89675cfda5d07162ffed8faf0a8e5bae4673d6eac501c2
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output-mpox
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14.4 MB |
sha256:dd533db3122f45fb7487a162a66c69f1daaa5fba565bd75af39e5bd4de49720d
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output-mumps
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378 KB |
sha256:c85c22a884430b2cf052a273aeed4ade1d0cb529b81c707bb1a3d1baa613ebe5
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output-ncov
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715 KB |
sha256:58a80fcb6bfeaada8ba1076f599610789f72c711b1f24b5b996b9c01e7aba5c3
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output-oropouche
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588 KB |
sha256:4415e7369f10d282625bcfe0ed8ddf6f030bc282231fae52ce3c9fdac4a33ebe
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output-rabies
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5.28 MB |
sha256:051ccec858b8cda336640f5f2481dcf8bb806c59a6632258f7b87f06eacf979f
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output-rsv
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1.2 MB |
sha256:58f50b7c31be2e9b650642e806a1d5bf80bd7de431c35276784324e1b189e4d4
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output-seasonal-cov
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2.47 MB |
sha256:51f6d655aef3efd1874890dc7000ed93fc75b6495f342659d3873600327be03f
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output-seasonal-flu
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60.2 KB |
sha256:4079d74909914917371cfbe991c2e2e3f40bbe92e99bb446fd059ec92d953267
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output-vcf-input-tutorial
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5.03 MB |
sha256:8fcbcbd2694176507eee87d12155459e98c9cdf209d06c952432c6bc32c2c953
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output-wnv
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241 KB |
sha256:1f5554b0d10c0c6975a63719adfa5cb29865672efb66b2b883c1f02cea0c7739
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output-yellow-fever
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2.13 MB |
sha256:a949749b70f8bd1f0f124f11317813e7886b2e022af762044c9f8d6da95fddd3
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output-zika
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807 KB |
sha256:50f62cf1e62ad8774b6ae78a8a126e2961fe5c42c9028ce071eda80c312bd4d3
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