CI #4029
corneliusroemerci.yaml
on: schedule
Matrix: pytest-cram
mypy
55s
pyright
23s
build-docs
/
build
1m 37s
check-docs
47s
check-subsample-config-schema
44s
Matrix: pathogen-repo-ci-v0
Matrix: pathogen-repo-ci
codecov
19s
rebuild-docker-image
0s
Annotations
19 warnings
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pyright
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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check-subsample-config-schema
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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mypy
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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pathogen-repo-ci (mumps)
Failed to save: Unable to reserve cache with key 2025-10-26-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci-v0 (seasonal-flu)
Failed to save: Unable to reserve cache with key 2025-10-26-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci-v0 (avian-flu)
Failed to save: Unable to reserve cache with key 2025-10-26-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (wnv)
Failed to save: Unable to reserve cache with key 2025-10-26-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci-v0 (ncov)
Failed to save: Unable to reserve cache with key 2025-10-26-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci-v0 (rsv)
Failed to save: Unable to reserve cache with key 2025-10-26-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (zika)
Failed to save: Unable to reserve cache with key 2025-10-26-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci-v0 (vcf-input-tutorial)
Failed to save: Unable to reserve cache with key 2025-10-26-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (mpox)
Failed to save: Unable to reserve cache with key 2025-10-26-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (dengue)
Failed to save: Unable to reserve cache with key 2025-10-26-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (measles)
Failed to save: Unable to reserve cache with key 2025-10-26-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (oropouche)
Failed to save: Unable to reserve cache with key 2025-10-26-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (seasonal-cov)
Failed to save: Unable to reserve cache with key 2025-10-26-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (yellow-fever)
Failed to save: Unable to reserve cache with key 2025-10-26-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (rabies)
Failed to save: Unable to reserve cache with key 2025-10-26-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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codecov
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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Artifacts
Produced during runtime
| Name | Size | Digest | |
|---|---|---|---|
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coverage
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191 KB |
sha256:0b1f035e4326a49edc666091f3087ce8e629f541f473395059c536e7e97753db
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output-avian-flu
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98.3 KB |
sha256:184f4be9313b24f51b53d11f7abc94e46da88dd9771eeb6a0793d715c0973be7
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output-dengue
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436 KB |
sha256:eda7dac4f5f18804a049b0082af38151a2beb7671d3db4d4d1f90220d73168a0
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output-lassa
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369 KB |
sha256:b05c897665ed5a56fd1e63b0c2d680ce1082617afea5e54c635c70944ef9d45d
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output-measles
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3.89 MB |
sha256:dffe79da57f80cadd77ba6aa363575a707040ac09077f82f175b567e30891779
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output-mpox
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14.4 MB |
sha256:f39b3da319cf511a12691b6fe40c87db6f56eb0be7b77cfd81bbb8e15b2fce0a
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output-mumps
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378 KB |
sha256:3e4a0732bea5a3a7d2546f06db86852670d63b0efddcbbd8c7e69d81a14c35d5
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output-ncov
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716 KB |
sha256:b7726af43de8cea45b01f8c09ab00e6593536e16ff5534e054b26a4afe344a4f
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output-oropouche
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588 KB |
sha256:87a5276e77e7aab34a0c16b3bd254c9ada8b6f633a603c52ea3e602f2e83d76d
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output-rabies
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5.28 MB |
sha256:dedfe379e512ac480d122046423eebbdf399467ccd0950682f216db6cd51aed6
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output-rsv
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1.19 MB |
sha256:01fe061faeb9f9dd9130cfe60ced9514da6a55da93e22a478a52799d44b21730
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output-seasonal-cov
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2.49 MB |
sha256:a0a2233af06dfbeac0956a6c092c8dd8a305b6233fc9723444e247e24ff4794d
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output-seasonal-flu
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60.3 KB |
sha256:3784fe2da584a94667989f05d0227c94bd9c35550d8f963da972b31678568575
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output-vcf-input-tutorial
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5.03 MB |
sha256:79640916c12e6cf55349930682d68e0b3287923a74204f5fc6bfde10bb564ac8
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output-wnv
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241 KB |
sha256:b861c658029ae9409d5c7467673e71a4a6933869beea4ecefb9ebdb6a2211455
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output-yellow-fever
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2.13 MB |
sha256:e36ec7e2f82421099b921e0a1d03b341b2ba02ff4d9855844377a511dfd27af4
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output-zika
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807 KB |
sha256:4174b91a6c5842b4055170f3c90ae84a2288909b2d65cc24fa0dbe3529f4107c
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