CI #4032
corneliusroemerci.yaml
on: schedule
Matrix: pytest-cram
mypy
56s
pyright
26s
build-docs
/
build
1m 59s
check-docs
45s
check-subsample-config-schema
47s
Matrix: pathogen-repo-ci-v0
Matrix: pathogen-repo-ci
codecov
19s
rebuild-docker-image
0s
Annotations
19 warnings
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pyright
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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check-subsample-config-schema
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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mypy
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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pathogen-repo-ci (mumps)
Failed to save: Unable to reserve cache with key 2025-10-27-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (lassa)
Failed to save: Unable to reserve cache with key 2025-10-27-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci-v0 (seasonal-flu)
Failed to save: Unable to reserve cache with key 2025-10-27-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci-v0 (avian-flu)
Failed to save: Unable to reserve cache with key 2025-10-27-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci-v0 (ncov)
Failed to save: Unable to reserve cache with key 2025-10-27-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (wnv)
Failed to save: Unable to reserve cache with key 2025-10-27-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (dengue)
Failed to save: Unable to reserve cache with key 2025-10-27-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci-v0 (rsv)
Failed to save: Unable to reserve cache with key 2025-10-27-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (mpox)
Failed to save: Unable to reserve cache with key 2025-10-27-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci-v0 (vcf-input-tutorial)
Failed to save: Unable to reserve cache with key 2025-10-27-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (measles)
Failed to save: Unable to reserve cache with key 2025-10-27-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (zika)
Failed to save: Unable to reserve cache with key 2025-10-27-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (seasonal-cov)
Failed to save: Unable to reserve cache with key 2025-10-27-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (yellow-fever)
Failed to save: Unable to reserve cache with key 2025-10-27-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (rabies)
Failed to save: Unable to reserve cache with key 2025-10-27-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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codecov
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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Artifacts
Produced during runtime
| Name | Size | Digest | |
|---|---|---|---|
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coverage
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191 KB |
sha256:2639636caf3344b561a91bf93c032e3952cb0f9815bb73d6b699b5402c07302e
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output-avian-flu
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98.2 KB |
sha256:642a9e122577a5f7e875995fce793a47d16c85abe304bb43dfcd300d7d0fea4f
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output-dengue
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435 KB |
sha256:81e9596e8326153e938003782b96e0301cf6d93bf66ddff6cd731362c353416f
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output-lassa
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370 KB |
sha256:27e3377c2086588e21f4db52c8e82cce688838b299859e13ec51e6580cfe914d
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output-measles
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3.91 MB |
sha256:8b13d66f61649dfcfb1b3e8373bb87c6ea2cc98c56bee3a9daff0245abf854a8
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output-mpox
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14.4 MB |
sha256:f22eb51b3aba8e8f277fd6df08baf52560f046c7937c798adaa33e9f80fa4481
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output-mumps
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378 KB |
sha256:6a025c6e4a0f643b46980022a605c7173cde27d672f138dc27c594d6458156cb
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output-ncov
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716 KB |
sha256:57392214306a0784073d2651a954ad69161cd6e8ba30dfffecee236c3b503d35
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output-oropouche
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588 KB |
sha256:3ab9f65dd4ada8665b04d9ed44cc81651d21b3e3f2af983eb3583aeb30df7582
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output-rabies
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5.28 MB |
sha256:9b221c659358496a54129d9d445efa3f4f48dbe2d043154d369047814622b7a5
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output-rsv
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1.2 MB |
sha256:cc84d8881b704e38aec4adc7351573cee68a15d142461ae8892bba916ac0e729
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output-seasonal-cov
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2.47 MB |
sha256:325b9d9613ea4b1a2969122a15e34bd52fc1f274229642754d9c0a629d8baf6c
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output-seasonal-flu
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60.3 KB |
sha256:26738fda0de55a4cdd5e38baf5b6ed8a254a0c05f37b6149e73e885670601449
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output-vcf-input-tutorial
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5.03 MB |
sha256:ee9db42c5f43fcf46238f7d071f633df74b0122b5a02ac58ba689c3b23b94c14
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output-wnv
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240 KB |
sha256:2a6d58a70af32567623f2c4c214148a6109c5ae10b8943182cbfc5df0c07ea13
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output-yellow-fever
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2.13 MB |
sha256:66c10ae0d5ed89eb91b1f4152eb5b219ebfa1b26332572a73b423e0a28ad16f6
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output-zika
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807 KB |
sha256:997d3c2be41749a1c7b2340283fbb7dcd59b3bdf0591bc5563def0891ef2d550
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