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Address general type issues #4036

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Address general type issues

Address general type issues #4036

Run time

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Job Run time
mypy
1m 1s
pyright
23s
check-docs
41s
check-subsample-config-schema
41s
pathogen-repo-ci-v0 (avian-flu)
57s
pathogen-repo-ci-v0 (ncov)
1m 1s
pathogen-repo-ci-v0 (seasonal-flu)
1m 2s
pathogen-repo-ci-v0 (vcf-input-tutorial)
1m 25s
pathogen-repo-ci-v0 (rsv)
1m 14s
pathogen-repo-ci (mumps)
59s
pathogen-repo-ci (mpox)
1m 22s
pathogen-repo-ci (rabies)
6m 0s
pathogen-repo-ci (measles)
1m 29s
pathogen-repo-ci (oropouche)
1m 29s
pathogen-repo-ci (lassa)
47s
pathogen-repo-ci (wnv)
1m 12s
pathogen-repo-ci (seasonal-cov)
2m 15s
test (python=3.9 biopython=1.80 numpy=latest)
16m 34s
pathogen-repo-ci (dengue)
1m 18s
test (python=3.9 biopython=1.85 numpy=latest)
17m 4s
pathogen-repo-ci (yellow-fever)
4m 9s
build-docs / build
1m 45s
test (python=3.10 biopython=1.82 numpy=latest)
16m 46s
pathogen-repo-ci (zika)
1m 29s
test (python=3.9 biopython=1.82 numpy=latest)
14m 57s
test (python=3.10 biopython=1.80 numpy=latest)
17m 4s
test (python=3.11 biopython=1.82 numpy=latest)
16m 36s
test (python=3.11 biopython=latest numpy=latest)
18m 5s
test (python=3.12 biopython=1.82 numpy=latest)
29m 54s
test (python=3.10 biopython=latest numpy=latest)
17m 38s
test (python=3.12 biopython=1.85 numpy=latest)
29m 34s
test (python=3.12 biopython=latest numpy=latest)
30m 17s
test (python=3.10 biopython=1.85 numpy=latest)
17m 54s
test (python=3.11 biopython=1.85 numpy=latest)
17m 28s
test (python=3.13 biopython=1.85 numpy=latest)
19m 31s
test (python=3.13 biopython=latest numpy=latest)
18m 37s
test (python=3.11 biopython=1.80 numpy=latest)
18m 17s
test (python=3.12 biopython=latest numpy=1.26.4)
27m 20s
test (python=3.10 biopython=1.80 numpy=1.26.4)
16m 35s
codecov
21s
rebuild-docker-image
0s
release
0s
6h 33m 11s