CI #4038
corneliusroemerci.yaml
on: schedule
Matrix: pytest-cram
mypy
59s
pyright
26s
build-docs
/
build
1m 46s
check-docs
44s
check-subsample-config-schema
48s
Matrix: pathogen-repo-ci-v0
Matrix: pathogen-repo-ci
codecov
13s
rebuild-docker-image
0s
Annotations
18 warnings
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pyright
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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check-subsample-config-schema
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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mypy
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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pathogen-repo-ci (lassa)
Failed to save: Unable to reserve cache with key 2025-10-28-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci-v0 (avian-flu)
Failed to save: Unable to reserve cache with key 2025-10-28-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci-v0 (ncov)
Failed to save: Unable to reserve cache with key 2025-10-28-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci-v0 (seasonal-flu)
Failed to save: Unable to reserve cache with key 2025-10-28-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (dengue)
Failed to save: Unable to reserve cache with key 2025-10-28-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci-v0 (rsv)
Failed to save: Unable to reserve cache with key 2025-10-28-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci-v0 (vcf-input-tutorial)
Failed to save: Unable to reserve cache with key 2025-10-28-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (mpox)
Failed to save: Unable to reserve cache with key 2025-10-28-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (oropouche)
Failed to save: Unable to reserve cache with key 2025-10-28-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (wnv)
Failed to save: Unable to reserve cache with key 2025-10-28-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (measles)
Failed to save: Unable to reserve cache with key 2025-10-28-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (zika)
Failed to save: Unable to reserve cache with key 2025-10-28-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (seasonal-cov)
Failed to save: Unable to reserve cache with key 2025-10-28-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (rabies)
Failed to save: Unable to reserve cache with key 2025-10-28-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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codecov
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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Artifacts
Produced during runtime
| Name | Size | Digest | |
|---|---|---|---|
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coverage
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191 KB |
sha256:b1b23e1c8e8a2519077f9f8e2177a5c9a05174337fe1c8c1ab8363584bdf3eba
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output-avian-flu
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98.3 KB |
sha256:e21ff17618fe0303465894cb5b342b2ddbc0e157d2783e1afd019bdfde94c093
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output-dengue
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435 KB |
sha256:5db70a504593ce89e4640fdff445a4c177c4a57904584d79f88e5a9ae4f6cf8b
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output-lassa
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369 KB |
sha256:f175781115ea207ddcbe3e18cff1206d14178ce794c3ee0c87e123dae2573d37
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output-measles
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3.89 MB |
sha256:54d3cee374d9b883921fd682c465ef7236bdafd9683f328c9bcb2b1766bdf7af
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output-mpox
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14.4 MB |
sha256:b30b152a2545cd17f44360602172794c1e26d4d6cca59e4d600ffe55563151c0
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output-mumps
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378 KB |
sha256:776c1324a26e836d1e0b911e97f5d4d91a3cedf7306772a44ade6150d5c7322a
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output-ncov
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717 KB |
sha256:359e6ab03fd00c871d05cc835c81cc24fc88d1acb414b511b7cd31c1540b5fcf
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output-oropouche
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588 KB |
sha256:47a83734c632e3f680b5def36dcbec2511ef56f8e471aae734c4512f9003b6f3
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output-rabies
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5.28 MB |
sha256:2ad1481108beffc3e17dd4dcd65aa93472530102877196b295e43b7c5801762a
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output-rsv
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1.2 MB |
sha256:8708754a3a9a44e13664b6c98524237c50d8db9950cb554aca402fe2f82b1f35
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output-seasonal-cov
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2.49 MB |
sha256:7ef94cbf71671bfc34eec063a0662a4619fbda2d6277c6a07f976efa2ed1b0dc
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output-seasonal-flu
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60.4 KB |
sha256:4ad185a514ddb8c2464c0b4e42c3cf8f8f2fc31d606acb2c27f673bd61e636c0
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output-vcf-input-tutorial
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5.03 MB |
sha256:f8d135d68d3257eadc2f1c910f4d6fdb9b3f152324bac2505ce193bdd06f4471
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output-wnv
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242 KB |
sha256:41bcff971610deb64774f697ba5804f8a93a69fc86eb27bee94c17bad39681db
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output-yellow-fever
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2.13 MB |
sha256:8d2ee56c495fc8780c9692c558441adb618d6cc4fca9c451fcb4d95d148fe5bf
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output-zika
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807 KB |
sha256:a60adbd2793d6e7e2416d695930940ec303290d03c7538e5da877b9fc426e902
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