CI #4044
corneliusroemerci.yaml
on: schedule
Matrix: pytest-cram
mypy
59s
pyright
25s
build-docs
/
build
1m 35s
check-docs
49s
check-subsample-config-schema
44s
Matrix: pathogen-repo-ci-v0
Matrix: pathogen-repo-ci
codecov
12s
rebuild-docker-image
0s
Annotations
19 warnings
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pyright
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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check-subsample-config-schema
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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mypy
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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pathogen-repo-ci (lassa)
Failed to save: Unable to reserve cache with key 2025-10-30-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci-v0 (ncov)
Failed to save: Unable to reserve cache with key 2025-10-30-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci-v0 (avian-flu)
Failed to save: Unable to reserve cache with key 2025-10-30-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci-v0 (seasonal-flu)
Failed to save: Unable to reserve cache with key 2025-10-30-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (wnv)
Failed to save: Unable to reserve cache with key 2025-10-30-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci-v0 (rsv)
Failed to save: Unable to reserve cache with key 2025-10-30-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci-v0 (vcf-input-tutorial)
Failed to save: Unable to reserve cache with key 2025-10-30-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (zika)
Failed to save: Unable to reserve cache with key 2025-10-30-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (mpox)
Failed to save: Unable to reserve cache with key 2025-10-30-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (dengue)
Failed to save: Unable to reserve cache with key 2025-10-30-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (oropouche)
Failed to save: Unable to reserve cache with key 2025-10-30-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (measles)
Failed to save: Unable to reserve cache with key 2025-10-30-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (seasonal-cov)
Failed to save: Unable to reserve cache with key 2025-10-30-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (yellow-fever)
Failed to save: Unable to reserve cache with key 2025-10-30-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (rabies)
Failed to save: Unable to reserve cache with key 2025-10-30-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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codecov
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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Artifacts
Produced during runtime
| Name | Size | Digest | |
|---|---|---|---|
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coverage
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191 KB |
sha256:9ad697e8351bc3479adbfc06dfa4be5e4085486d88788f249fd4e2665ee932c2
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output-avian-flu
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108 KB |
sha256:cb679e4e615a9ae1b98634b859fed2871c9da3f72e66d09416e064b3d2c31335
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output-dengue
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435 KB |
sha256:5a9dcf27ba1d2c7fa74927e164b6cdb0be3ed9d01de3cff34b5693b4b2480901
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output-lassa
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369 KB |
sha256:eea0fd137b99e65489af7c0f31a10638a5dde758b98fa23e28896c9fdf07114f
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output-measles
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3.89 MB |
sha256:709c66880712ae4d6f452f96d05ad96ad9beb4242a6b80471bf287c2cf1f2d92
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output-mpox
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14.4 MB |
sha256:07e3aa239674a763e55057e26aa586cc7e3d6b7b783a00e99ef6877c55a9bf7a
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output-mumps
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378 KB |
sha256:b087d65be85add4f3de475e9e0781aac3556529fdb21ee640e520bf0dba1f771
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output-ncov
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713 KB |
sha256:78c1cc420fcbba5f9841e46fe10f15608c89ee1d0f0817b659076b40809aac23
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output-oropouche
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588 KB |
sha256:1de8b6cb26cbab3be9b17132f29f10cce8e60303039ea3a002848680e07321cb
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output-rabies
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5.28 MB |
sha256:531d8eb0937c5abbd9b47a88a15c1b962b7e334ad3211ce69fd8ea0ededb1db3
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output-rsv
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1.21 MB |
sha256:4bcc29357733580c1feee98b938ec1d9567237615dd48087f724fc6cf30223f7
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output-seasonal-cov
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2.46 MB |
sha256:afdff4ef59c6b7bfdd7e504c874540bde3abf62e7a6e15781a8cf1a90b9eb8c4
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output-seasonal-flu
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60.3 KB |
sha256:ca68a31608b758cd353176f9181ce58fcd034ce89e4b331e0838d30dfcd60fa0
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output-vcf-input-tutorial
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5.03 MB |
sha256:dadea120537a5160151cdeebf5d02b8ee510e2782334d91ed1fc52ffc35b5eb0
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output-wnv
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241 KB |
sha256:ff4aa2cbce9c82f36c1001263245fb9d44863b3cd5cfb4b50a7e8225cc5e100a
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output-yellow-fever
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2.12 MB |
sha256:2c9895e12201d9e536242daecd9dbb3c1c9364993176629be599e548a35cae04
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output-zika
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807 KB |
sha256:b608d1cbf74ebf11a41f0dc9373ffc313e0bce760071d5cce22d11527f085600
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