subsample: Improve default search paths, allow customization #4045
victorlinci.yaml
on: pull_request
Matrix: pytest-cram
mypy
49s
pyright
23s
build-docs
/
build
1m 28s
check-docs
40s
check-subsample-config-schema
43s
Matrix: pathogen-repo-ci-v0
Matrix: pathogen-repo-ci
codecov
16s
rebuild-docker-image
0s
Annotations
4 warnings
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pyright
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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mypy
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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check-subsample-config-schema
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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codecov
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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Artifacts
Produced during runtime
| Name | Size | Digest | |
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coverage
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191 KB |
sha256:7ba05de15fbb7c6ef5f79cbd0920b7f646a25b7ea82ddf0627ff247ac2267f0a
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output-avian-flu
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108 KB |
sha256:55aa1dd6b51e7b2feccdfb30e0b41f6e7b088cb1ec60c725a4f71b1f60020cbe
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output-dengue
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436 KB |
sha256:eae24d1e6d2c398e0f16cc257307a087f6e8b30d7b80c6654bbe4098720ab46a
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output-lassa
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370 KB |
sha256:67622c63c75856187a67d228c1a38a8b09cfd088879604a071e9ff67ed0bb482
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output-measles
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3.91 MB |
sha256:4635240b2e7973f2e48a55d917961e9b218b6ca54d03ba803fa559180528a28d
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output-mpox
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14.4 MB |
sha256:25cbc6b97c4f20fc9d16c67de560e8872f715a510d2ce82af4378e566ca59969
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output-mumps
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378 KB |
sha256:7b875674283a6947561404f006ae5355395bd081a0429806a583d37c66b6e0c0
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output-ncov
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716 KB |
sha256:afe56593d45ecb82b184df21409c77500f7e1618f16f40da6ef92ece6b0d87ce
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output-oropouche
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588 KB |
sha256:dd301283fb52dd454f32421dba6c82336d76415a9a4063dc29c4961df6d42fe9
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output-rabies
|
5.28 MB |
sha256:3e318a3f7e744a441082e9ce1403e66ccd1ddbc0ef0e60b26d48aa8502cf8c76
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output-rsv
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1.21 MB |
sha256:bbc0526b22cc5d0fc4628b2af2405fcf8ae5f89f41d1bc725c6fb6f69911d413
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output-seasonal-cov
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2.48 MB |
sha256:9de25efa80ff16acc7011c1a01d9a59bb0d5b1a7a45dc59873e87d0ed02e6be2
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output-seasonal-flu
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60.3 KB |
sha256:a74fc5cabf99a4c2bab368270d629b7207486ce090305925545418730e75676a
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output-vcf-input-tutorial
|
5.03 MB |
sha256:43fc5602524e7115ced147892a4d6dbd5273bd9eb559ed47a7491eab8a704a77
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output-wnv
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242 KB |
sha256:87f1557603cfa3de3373345ee727046a52338050a6cd52a014a68a3c45b01f59
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output-yellow-fever
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2.11 MB |
sha256:6498bb473008df4b31fafd535138af87a89582569f0b95e6b87bc450b884b7a2
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output-zika
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807 KB |
sha256:61bba790eb2038849bde1a801b1d46ede7f4f987aad9e7d83d7d34f4a604e58c
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