CI #4050
corneliusroemerci.yaml
on: schedule
Matrix: pytest-cram
mypy
56s
pyright
25s
build-docs
/
build
1m 26s
check-docs
45s
check-subsample-config-schema
45s
Matrix: pathogen-repo-ci-v0
Matrix: pathogen-repo-ci
codecov
14s
rebuild-docker-image
0s
Annotations
1 error and 17 warnings
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build-docs / build
Process completed with exit code 1.
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pyright
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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check-subsample-config-schema
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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mypy
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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pathogen-repo-ci (lassa)
Failed to save: Unable to reserve cache with key 2025-11-03-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci-v0 (avian-flu)
Failed to save: Unable to reserve cache with key 2025-11-03-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (mumps)
Failed to save: Unable to reserve cache with key 2025-11-03-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (wnv)
Failed to save: Unable to reserve cache with key 2025-11-03-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci-v0 (seasonal-flu)
Failed to save: Unable to reserve cache with key 2025-11-03-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (dengue)
Failed to save: Unable to reserve cache with key 2025-11-03-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (mpox)
Failed to save: Unable to reserve cache with key 2025-11-03-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci-v0 (vcf-input-tutorial)
Failed to save: Unable to reserve cache with key 2025-11-03-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci-v0 (ncov)
Failed to save: Unable to reserve cache with key 2025-11-03-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (measles)
Failed to save: Unable to reserve cache with key 2025-11-03-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (oropouche)
Failed to save: Unable to reserve cache with key 2025-11-03-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (yellow-fever)
Failed to save: Unable to reserve cache with key 2025-11-03-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (rabies)
Failed to save: Unable to reserve cache with key 2025-11-03-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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codecov
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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Artifacts
Produced during runtime
| Name | Size | Digest | |
|---|---|---|---|
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coverage
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191 KB |
sha256:e860d4c33d22ba2ac4cd8d1074655cdef0416e68bc07d09d8dddbe04c37bfee4
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output-avian-flu
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108 KB |
sha256:27de96e0c0a95a2772c8579d9281340397f79030e79f577e5a4d34a31632830b
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output-dengue
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436 KB |
sha256:51e55ce00f9fe4b4237f861e9c49831f742ac47c83c38494270021e48f12cf2d
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output-lassa
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370 KB |
sha256:0efd8fff88668be57d3e7dff97f1f5a0b229e4aba7a98b317195e1fbbb8e592f
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output-measles
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3.9 MB |
sha256:e0fb5165ebd589b70a556d48929fdf72d3211640e2fc14e4687b65deb22454ed
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output-mpox
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14.4 MB |
sha256:5854efb68bb180a1f827094cd771a237f4f270d4947afcfc426da8189ff76f3d
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output-mumps
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378 KB |
sha256:c10dc6e182b802e9d3ab6fb90602dee35830016491bfecd831bc99910462c017
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output-ncov
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711 KB |
sha256:2862981bde52e7a93947dce214fa8d805b1dd5a22f3fec4771b1326269d2156e
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output-oropouche
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588 KB |
sha256:9abc87dd281c965886a3a4b7b801882b9c5c59d382696a61dcda3bfedc4d4aa9
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output-rabies
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5.28 MB |
sha256:7d5293c69f1b19002bf4792d87c57f10b079755a47e6222b859574aac3671a71
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output-rsv
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1.21 MB |
sha256:ee6079b72bc34ff55c6b5df997fbe078f3caebd71df4bbe86f9e49c82d2527b4
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output-seasonal-cov
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2.48 MB |
sha256:fc18ff2bf20f14236aa0e1a8ce992d543a06a6bc5269fcc5d5652f992c712dba
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output-seasonal-flu
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60.3 KB |
sha256:cd0859d1781f9d8bed735d690dc662275b83042f7df0b4dd5b9caa7a3021705f
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output-vcf-input-tutorial
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5.03 MB |
sha256:41b1df7b40bffa0bb397a24ba688e2149f811673f5178b7ae4e65054fb38e2dc
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output-wnv
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241 KB |
sha256:8c5eaddeb3cadea24f71b50c9def308dc373d5be463048ebaee3c038e3f25146
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output-yellow-fever
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2.14 MB |
sha256:3437165c7d36b9caa4644673a2ae7d322ecd105a775ace78f803baf9a5ad73d9
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output-zika
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807 KB |
sha256:a28196f4061a692f9a825b2dd1125feeca4a8e3a27a23b1bc557ff5ab0a0f9fd
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