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export: support export of URL for non-string values #4053

export: support export of URL for non-string values

export: support export of URL for non-string values #4053

Triggered via pull request November 4, 2025 19:29
Status Failure
Total duration 17m 42s
Artifacts 16

ci.yaml

on: pull_request
Matrix: pytest-cram
Matrix: pathogen-repo-ci-v0
Matrix: pathogen-repo-ci
rebuild-docker-image
0s
rebuild-docker-image
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31 errors and 3 warnings
test (python=3.10 biopython=1.80 numpy=latest)
Process completed with exit code 1.
test (python=3.9 biopython=1.85 numpy=latest)
The strategy configuration was canceled because "pytest-cram._3_10_1_80" failed
test (python=3.9 biopython=1.85 numpy=latest)
The operation was canceled.
test (python=3.10 biopython=1.82 numpy=latest)
The strategy configuration was canceled because "pytest-cram._3_10_1_80" failed
test (python=3.10 biopython=1.82 numpy=latest)
The operation was canceled.
test (python=3.12 biopython=1.82 numpy=latest)
The strategy configuration was canceled because "pytest-cram._3_10_1_80" failed
test (python=3.12 biopython=1.82 numpy=latest)
The operation was canceled.
test (python=3.10 biopython=1.85 numpy=latest)
The strategy configuration was canceled because "pytest-cram._3_10_1_80" failed
test (python=3.10 biopython=1.85 numpy=latest)
The operation was canceled.
test (python=3.11 biopython=latest numpy=latest)
The strategy configuration was canceled because "pytest-cram._3_10_1_80" failed
test (python=3.11 biopython=latest numpy=latest)
The operation was canceled.
test (python=3.11 biopython=1.80 numpy=latest)
The strategy configuration was canceled because "pytest-cram._3_10_1_80" failed
test (python=3.11 biopython=1.80 numpy=latest)
The operation was canceled.
test (python=3.11 biopython=1.85 numpy=latest)
The strategy configuration was canceled because "pytest-cram._3_10_1_80" failed
test (python=3.11 biopython=1.85 numpy=latest)
The operation was canceled.
test (python=3.12 biopython=latest numpy=1.26.4)
The strategy configuration was canceled because "pytest-cram._3_10_1_80" failed
test (python=3.12 biopython=latest numpy=1.26.4)
The operation was canceled.
test (python=3.12 biopython=latest numpy=latest)
The strategy configuration was canceled because "pytest-cram._3_10_1_80" failed
test (python=3.12 biopython=latest numpy=latest)
The operation was canceled.
test (python=3.13 biopython=1.85 numpy=latest)
The strategy configuration was canceled because "pytest-cram._3_10_1_80" failed
test (python=3.13 biopython=1.85 numpy=latest)
The operation was canceled.
test (python=3.12 biopython=1.85 numpy=latest)
The strategy configuration was canceled because "pytest-cram._3_10_1_80" failed
test (python=3.12 biopython=1.85 numpy=latest)
The operation was canceled.
test (python=3.10 biopython=latest numpy=latest)
The strategy configuration was canceled because "pytest-cram._3_10_1_80" failed
test (python=3.10 biopython=latest numpy=latest)
The operation was canceled.
test (python=3.11 biopython=1.82 numpy=latest)
The strategy configuration was canceled because "pytest-cram._3_10_1_80" failed
test (python=3.11 biopython=1.82 numpy=latest)
The operation was canceled.
test (python=3.10 biopython=1.80 numpy=1.26.4)
The strategy configuration was canceled because "pytest-cram._3_10_1_80" failed
test (python=3.10 biopython=1.80 numpy=1.26.4)
The operation was canceled.
test (python=3.13 biopython=latest numpy=latest)
The strategy configuration was canceled because "pytest-cram._3_10_1_80" failed
test (python=3.13 biopython=latest numpy=latest)
The operation was canceled.
pyright
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
check-subsample-config-schema
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
mypy
The `python-version` input is not set. The version of Python currently in `PATH` will be used.

Artifacts

Produced during runtime
Name Size Digest
output-avian-flu
108 KB
sha256:382afa358dca38e38be6544b169d67c90a41cf1266a8cbb07c6589d5f9b7a326
output-dengue
436 KB
sha256:c19f98709a7010d71f5233eb82e66b185d369d9de612608deda3bfea49d43d02
output-lassa
370 KB
sha256:eb88a366cd33d9e3f59c231747cedad0ce1983660a8796fbff3a970cefd38d79
output-measles
3.91 MB
sha256:547de210112822467133e429e37cb4ae268df8e2093d9b12b96fe3e2874c57f2
output-mpox
14.4 MB
sha256:fea0a01715d3cceeb7ca0cf44b27d8f2bf247cd2cef8be3862be7c7c67218ce2
output-mumps
378 KB
sha256:d09747c3efba578f00b2ef61ccdee19fa1258b38d52103997ca165cbbebf2c3c
output-ncov
714 KB
sha256:7dc849791a7b9e0bc61b15f046e46b9c86d4a2b1d75c913ac2ecbeb7eb2119e8
output-oropouche
588 KB
sha256:2588a56359855a47a857f1ce568d112bf2cefc03e5e9ffa3e191c18a8fa7ed7b
output-rabies
5.28 MB
sha256:2ff0c24ef2e1df57d5b900a4460d4a9def07dd24915027067c79a35a0832bd0c
output-rsv
1.21 MB
sha256:e9bb346c8b1057956342bbe423cbc49761faa77bd881121fff8d5bac436f3620
output-seasonal-cov
2.49 MB
sha256:80522e484208ff001ee8cabcd3c4b92bffac68c1b20cc6f52565b36fe9864ce9
output-seasonal-flu
60.3 KB
sha256:462235f4da8ddf31ffbb6adcacb7c056da6aa00c8a0a9a9f99e73888985f2de8
output-vcf-input-tutorial
5.03 MB
sha256:2be53db41a81ecc248502b429bf80f1c2893ea7bed2923c96963695508f278c5
output-wnv
241 KB
sha256:4b69b29c49a266733e0b11f99bf142564a6f0d4383fd8bf5c3561ca7e65fec0a
output-yellow-fever
2.15 MB
sha256:84fe165136ac460d88e224a24220afd90c28b4532562a1ba89416f3e6de2911f
output-zika
807 KB
sha256:615a8b35c03a65274a152b2817ee7140e550fb40c19f3789fd353292028462ed