CI #4060
corneliusroemerci.yaml
on: schedule
Matrix: pytest-cram
mypy
49s
pyright
21s
build-docs
/
build
1m 48s
check-docs
42s
check-subsample-config-schema
46s
Matrix: pathogen-repo-ci-v0
Matrix: pathogen-repo-ci
codecov
14s
rebuild-docker-image
0s
Annotations
19 warnings
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pyright
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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mypy
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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check-subsample-config-schema
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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pathogen-repo-ci (lassa)
Failed to save: Unable to reserve cache with key 2025-11-08-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci-v0 (avian-flu)
Failed to save: Unable to reserve cache with key 2025-11-08-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci-v0 (seasonal-flu)
Failed to save: Unable to reserve cache with key 2025-11-08-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (mumps)
Failed to save: Unable to reserve cache with key 2025-11-08-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci-v0 (rsv)
Failed to save: Unable to reserve cache with key 2025-11-08-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (dengue)
Failed to save: Unable to reserve cache with key 2025-11-08-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci-v0 (vcf-input-tutorial)
Failed to save: Unable to reserve cache with key 2025-11-08-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (mpox)
Failed to save: Unable to reserve cache with key 2025-11-08-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (zika)
Failed to save: Unable to reserve cache with key 2025-11-08-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (wnv)
Failed to save: Unable to reserve cache with key 2025-11-08-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (oropouche)
Failed to save: Unable to reserve cache with key 2025-11-08-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (measles)
Failed to save: Unable to reserve cache with key 2025-11-08-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (seasonal-cov)
Failed to save: Unable to reserve cache with key 2025-11-08-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (yellow-fever)
Failed to save: Unable to reserve cache with key 2025-11-08-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (rabies)
Failed to save: Unable to reserve cache with key 2025-11-08-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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codecov
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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Artifacts
Produced during runtime
| Name | Size | Digest | |
|---|---|---|---|
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coverage
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190 KB |
sha256:b9f75ff7c60ce4736100bfb39e4addb49784f0e7d76ffc21272dc8985eaf6331
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output-avian-flu
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108 KB |
sha256:41cc5afad44dddf58bb477ef15691f3949c82d422b05c7ade8793c93050f1d17
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output-dengue
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436 KB |
sha256:6480f05a5eef8f6b40d29352bb09b11c0c3c2913963355f7f97ba874c4b5b4a6
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output-lassa
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370 KB |
sha256:2f8df33861afa9c8212193a3ed3c6fda0b4394296879a2c2d5d5717d664cbbee
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output-measles
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3.92 MB |
sha256:57b732b07e9810160caabd82f0ef7c245e1f95cb1b1cc7457469f45e592ae453
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output-mpox
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14.4 MB |
sha256:eda4d0bcc7706e8e481696695838128d2048509501bb5ffc26c143535cdd1a30
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output-mumps
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378 KB |
sha256:3dd879ebdd6bcd0d6953fe217f8aeebfb43add3b15f74ae83d8210d4cde988e4
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output-ncov
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715 KB |
sha256:c60f783791c03e8bacddb0121342790f64bc001ea51a1367dce4544727d34b21
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output-oropouche
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588 KB |
sha256:6a0675075e90f92c5195928a885a7d32cf09f5ce2a68d8db2e77c07a22387da5
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output-rabies
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5.29 MB |
sha256:c6fca4aafb810d9bbd9d4522a70927f0e3a1fe8c0ab61708aed43dd1f1d7acac
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output-rsv
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1.21 MB |
sha256:df97e3d96d11dd0b64715136d2fd92955de1b350b81391e5d3bbbae66f92e8d1
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output-seasonal-cov
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2.49 MB |
sha256:5f96175cc04c5bbd73cc9fdcf032ab1121530fd0943f6c9094dc81685cc9e34e
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output-seasonal-flu
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60.2 KB |
sha256:e65971e53349926ba79a2b11467ff9a6d4247496f403e6d069b6d1731c72c052
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output-vcf-input-tutorial
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5.03 MB |
sha256:a09920f55ef911887d40b77c66669f80e12797511bdb495d9d0fa8a8adeaf3db
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output-wnv
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241 KB |
sha256:d2dfe805cbbe935eabf21428972bbc7c0a505997ee6c8ebd8f0683bb3b869f73
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output-yellow-fever
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2.13 MB |
sha256:7bfb83dfbc7fc605f5ef4f1984870618403e950f9a662941f62deaf445475da2
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output-zika
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838 KB |
sha256:d77fd2ef00dbd9ae82fec61df5a62323f18230034665bc65459ec965cb97a0f0
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