CI #4063
corneliusroemerci.yaml
on: schedule
Matrix: pytest-cram
mypy
53s
pyright
20s
build-docs
/
build
1m 27s
check-docs
39s
check-subsample-config-schema
41s
Matrix: pathogen-repo-ci-v0
Matrix: pathogen-repo-ci
codecov
16s
rebuild-docker-image
0s
Annotations
19 warnings
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pyright
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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check-subsample-config-schema
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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mypy
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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pathogen-repo-ci (lassa)
Failed to save: Unable to reserve cache with key 2025-11-11-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci-v0 (avian-flu)
Failed to save: Unable to reserve cache with key 2025-11-11-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci-v0 (ncov)
Failed to save: Unable to reserve cache with key 2025-11-11-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (mumps)
Failed to save: Unable to reserve cache with key 2025-11-11-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci-v0 (seasonal-flu)
Failed to save: Unable to reserve cache with key 2025-11-11-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (wnv)
Failed to save: Unable to reserve cache with key 2025-11-11-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci-v0 (rsv)
Failed to save: Unable to reserve cache with key 2025-11-11-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci-v0 (vcf-input-tutorial)
Failed to save: Unable to reserve cache with key 2025-11-11-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (mpox)
Failed to save: Unable to reserve cache with key 2025-11-11-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (dengue)
Failed to save: Unable to reserve cache with key 2025-11-11-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (measles)
Failed to save: Unable to reserve cache with key 2025-11-11-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (zika)
Failed to save: Unable to reserve cache with key 2025-11-11-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (oropouche)
Failed to save: Unable to reserve cache with key 2025-11-11-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (seasonal-cov)
Failed to save: Unable to reserve cache with key 2025-11-11-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (yellow-fever)
Failed to save: Unable to reserve cache with key 2025-11-11-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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codecov
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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Artifacts
Produced during runtime
| Name | Size | Digest | |
|---|---|---|---|
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coverage
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190 KB |
sha256:98523c76048dd7ae966cac243b7b4faeb19d2aa81f5990470be839c2ec6049b8
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output-avian-flu
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108 KB |
sha256:a0bffc5cae528dcc5f1da7496cd2028afef3c3093f6394582afa104055d0612d
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output-dengue
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436 KB |
sha256:97da2ef6d9e96fc308f1f10a4d10e84414872f5e5b98bd8a532e473a150c8d4a
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output-lassa
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369 KB |
sha256:52c0797f03243ba0f021869c832b88d76694ed2bc8fcc0acc0580c2a1cbf4c4e
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output-measles
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3.9 MB |
sha256:07a7002175f62b3d27b95ba06e57c25b3505064e8fc02a0f6c33e5a08ac07f33
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output-mpox
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14.4 MB |
sha256:501578ca22302817f79011dcbad6cb497616a38ef2fd7ab65e550ddf8dbadadb
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output-mumps
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379 KB |
sha256:ec41062ce44f1eca928a57f3c32d931f29e3bb03f45511b3fe908e3dea437953
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output-ncov
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720 KB |
sha256:1f072ea01ac65e712679fa83b9839ec713a05e9393d0bcdb0c8aeba6b3fe2ae7
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output-oropouche
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588 KB |
sha256:aebcf279c9619ef9191158b9891bb434d6a1aa5a03d4dab94eb0cdd6810c97cf
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output-rabies
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5.3 MB |
sha256:4287e77878d7f91e4b5a973959367dc589eb606f4cbf645889b8f3bee9f6d26e
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output-rsv
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1.21 MB |
sha256:591fb20fc4270582959a91da33309944971b9785d71f62c0eaca2fc252bfec6b
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output-seasonal-cov
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2.5 MB |
sha256:4ed0ba21ad931ae55c3d7d0a886f3d670216aa80dc79af08db20a11527f72c45
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output-seasonal-flu
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60.3 KB |
sha256:ba55942da9a63662591a0966f3ebec6f00a22d84998e73c601db59f0a779d949
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output-vcf-input-tutorial
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5.03 MB |
sha256:e2c3ad8e28a5727aaa86199febb85f0eba3001cebf9d5fc1d6e96f6b67b8a668
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output-wnv
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241 KB |
sha256:ea7dae910da5e3873631fbdca74fd60d244414f53ddd7cd9365d887427a9dd38
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output-yellow-fever
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2.13 MB |
sha256:dd73b468a319f9219d0c99ce9a184af4125fc31207ac9f2388d8d87634d488e7
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output-zika
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838 KB |
sha256:8ffce0c9add64a356dd814fb5a3ad5a2958bb0a9ddb5538b198732c408035211
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