CI #4064
corneliusroemerci.yaml
on: schedule
Matrix: pytest-cram
mypy
51s
pyright
19s
build-docs
/
build
2m 18s
check-docs
42s
check-subsample-config-schema
45s
Matrix: pathogen-repo-ci-v0
Matrix: pathogen-repo-ci
codecov
16s
rebuild-docker-image
0s
Annotations
19 warnings
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pyright
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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check-subsample-config-schema
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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mypy
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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pathogen-repo-ci (lassa)
Failed to save: Unable to reserve cache with key 2025-11-12-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (mumps)
Failed to save: Unable to reserve cache with key 2025-11-12-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci-v0 (seasonal-flu)
Failed to save: Unable to reserve cache with key 2025-11-12-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci-v0 (ncov)
Failed to save: Unable to reserve cache with key 2025-11-12-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci-v0 (avian-flu)
Failed to save: Unable to reserve cache with key 2025-11-12-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (wnv)
Failed to save: Unable to reserve cache with key 2025-11-12-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci-v0 (vcf-input-tutorial)
Failed to save: Unable to reserve cache with key 2025-11-12-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci-v0 (rsv)
Failed to save: Unable to reserve cache with key 2025-11-12-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (dengue)
Failed to save: Unable to reserve cache with key 2025-11-12-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (measles)
Failed to save: Unable to reserve cache with key 2025-11-12-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (oropouche)
Failed to save: Unable to reserve cache with key 2025-11-12-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (zika)
Failed to save: Unable to reserve cache with key 2025-11-12-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (mpox)
Failed to save: Unable to reserve cache with key 2025-11-12-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (seasonal-cov)
Failed to save: Unable to reserve cache with key 2025-11-12-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (yellow-fever)
Failed to save: Unable to reserve cache with key 2025-11-12-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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codecov
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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Artifacts
Produced during runtime
| Name | Size | Digest | |
|---|---|---|---|
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coverage
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190 KB |
sha256:0d4d41b03d8cfeab0d6253cad46ba4bb6959886b9e95efd33841b97d12a4359b
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output-avian-flu
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108 KB |
sha256:071ae2f63d18709e49a66170917c5683290e14e8a8377b02c9be63455e06ecbc
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output-dengue
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436 KB |
sha256:494c44022c9c30c6947626caaf3e826cdfbc9b30095a54b67cc9b8043bbf6f80
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output-lassa
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369 KB |
sha256:994862a52f8f0972f4e64a9635d35b92e4efa045f4f34ef29b907dc6a91a8258
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output-measles
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3.91 MB |
sha256:1a00802a32c5e180176b7ced8b04b532b8f88f42d1318e07cdf5d7d6b65cc966
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output-mpox
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23.1 MB |
sha256:961451010da9ce1c195be01a26bb66f561b3c6e2191ab782542ac1d9f2ae8f72
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output-mumps
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379 KB |
sha256:08ed4c8c653bd13a6e658d48a132e0e3453aec293b31d595ceb574ccb3cd2e77
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output-ncov
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713 KB |
sha256:fd6a47c9aade64e4b3025ae54fdd4919fea111f1c891739ee567fe543dd7b1a7
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output-oropouche
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588 KB |
sha256:e908245b70c89777b999691e994708e654a02e86a456a1d8ed159cd1cd2671b6
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output-rabies
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5.3 MB |
sha256:419ec2750d0df7e86696fc1e3689bf2aa187f0e32ffe72c76d39bdf4f75c47dc
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output-rsv
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1.21 MB |
sha256:f674e53c7b7664c73b451e2315e8edcf7254c2f01e8b2ba91a668f917351b22c
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output-seasonal-cov
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2.47 MB |
sha256:d063279ee64f4beb17df49721c4d3b82679a338eb8ad51e26b6f8b4e20204941
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output-seasonal-flu
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60.3 KB |
sha256:2a786811b2e027fb1fdf24534276dd47b4e9503300d5c09a96818f2bf3b53863
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output-vcf-input-tutorial
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5.03 MB |
sha256:70b6a1fce7fc982717db94872b185cde886bdfb707261f29b654ba48cc019b1b
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output-wnv
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241 KB |
sha256:64d35bb7feac5b62205df6be7f4621a2dd90938079a64d4d91b050d94c85355b
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output-yellow-fever
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2.11 MB |
sha256:3be0e0d6bde4205599a5ffe7940e8c0528263dc90c226309b1e5d22b68e6b22d
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output-zika
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838 KB |
sha256:301ff6d63f3ecfbe130bac62855ee6d5297b969aae7ddf097a77b24c38f88c53
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