CI #4066
corneliusroemerci.yaml
on: schedule
Matrix: pytest-cram
mypy
51s
pyright
24s
build-docs
/
build
1m 37s
check-docs
44s
check-subsample-config-schema
44s
Matrix: pathogen-repo-ci-v0
Matrix: pathogen-repo-ci
codecov
18s
rebuild-docker-image
Annotations
19 warnings
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pyright
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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check-subsample-config-schema
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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mypy
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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pathogen-repo-ci (lassa)
Failed to save: Unable to reserve cache with key 2025-11-14-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci-v0 (avian-flu)
Failed to save: Unable to reserve cache with key 2025-11-14-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (mumps)
Failed to save: Unable to reserve cache with key 2025-11-14-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci-v0 (ncov)
Failed to save: Unable to reserve cache with key 2025-11-14-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci-v0 (seasonal-flu)
Failed to save: Unable to reserve cache with key 2025-11-14-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (dengue)
Failed to save: Unable to reserve cache with key 2025-11-14-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (wnv)
Failed to save: Unable to reserve cache with key 2025-11-14-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (zika)
Failed to save: Unable to reserve cache with key 2025-11-14-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci-v0 (vcf-input-tutorial)
Failed to save: Unable to reserve cache with key 2025-11-14-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (oropouche)
Failed to save: Unable to reserve cache with key 2025-11-14-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (measles)
Failed to save: Unable to reserve cache with key 2025-11-14-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (mpox)
Failed to save: Unable to reserve cache with key 2025-11-14-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (seasonal-cov)
Failed to save: Unable to reserve cache with key 2025-11-14-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (yellow-fever)
Failed to save: Unable to reserve cache with key 2025-11-14-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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pathogen-repo-ci (rabies)
Failed to save: Unable to reserve cache with key 2025-11-14-linux-64-augur-args-30d39f4-root-dcc80ee-bin-7f980036a54bf9b731e96423dab2167633dab2652673dc4fef598b730ac364cb, another job may be creating this cache.
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codecov
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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Artifacts
Produced during runtime
| Name | Size | Digest | |
|---|---|---|---|
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coverage
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190 KB |
sha256:c5a9be408a56c2b782a0c7507b191b813b1db6fdbe56b11e6b28b0b5b23980d5
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output-avian-flu
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108 KB |
sha256:1fbc30f5eea1295e7981eb0f72a19ff3fbfd4139656be173aedc3d15729034fd
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output-dengue
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436 KB |
sha256:9eee8839bde01c6c085a5671a9a0d5e054d2799882ccb1e42563be89ccbcea73
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output-lassa
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370 KB |
sha256:91d5c8048e73c9d956974ebed5ba2d9dcbc3e7abc9a70263c04c8ea4a60db232
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output-measles
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3.91 MB |
sha256:e0c43819ef03bcfaf3351b8019c837996d2e43a4deda403091d6b41756938bdb
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output-mpox
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23.1 MB |
sha256:fdca109324a8bb2b879f4ca2af1f9900fd2efccb7c2802dc5bc600d161bc0419
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output-mumps
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379 KB |
sha256:693691a484fbbfe4ef8e8f61a4a7065274700b391a67783502d2d0cada99be32
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output-ncov
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712 KB |
sha256:bad865c04aa136e41d0e67fed73b2742498487f3f91a1eba88b3643e2eff0272
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output-oropouche
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588 KB |
sha256:2d5c5235b8ce034db3f7e511c6267df4af29830e3303d5933ed89c2e70dcb724
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output-rabies
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5.3 MB |
sha256:12a3e19637ded729d7c6bcd03691aaa734d92552f622a9ba187e4ca32b6f28c6
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output-rsv
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1.21 MB |
sha256:407b6218db8adf06b233448ccdfbf9882012da5a7f1e5f1c9b23a635a4f4d03d
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output-seasonal-cov
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2.5 MB |
sha256:763a5149be1e1a924c53ac7f462171fb3797ac09c0023e3ebc4955e78b5c51fc
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output-seasonal-flu
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60.3 KB |
sha256:4c2eb87a1235863ff39cb0537bd739f9e82a6aeb3c37d54d092d6cad0006502d
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output-vcf-input-tutorial
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5.03 MB |
sha256:4c6878822ac9d4bd2ab8b02ed7659ced5a176c851e18db6d808813cd207fe3f2
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output-wnv
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242 KB |
sha256:30c071fa4d967781b510ffde901af3451c3fcea4cf5e44514e87ce53e873db55
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output-yellow-fever
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2.12 MB |
sha256:1f4b071c374b0ef8dadf175cf648a3b5aa4a7376b407afb26f30cc7b795f68a3
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output-zika
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838 KB |
sha256:6d18ddd7b389f48771305a35132a468ee8efa51bdc38e9dd730bd3953465ae9a
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