Skip to content

Actions: nf-core/methylseq

Actions

Fix linting from a comment

Actions

Loading...
Loading

Show workflow options

Create status badge

Loading
fix_linting.yml
39 workflow runs
39 workflow runs

Filter by Event

Filter by Status

Filter by Branch

Filter by Actor

Bismark soft clip --local_alignment True keeps L,value,value Fix linting from a comment #39: Issue comment #472 (comment) created by sateeshperi
1s
1s
bump default and bismark tests after modules update 0.25.1 Fix linting from a comment #38: Issue comment #569 (comment) created by eduardcasas
1s
1s
bump default and bismark tests after modules update 0.25.1 Fix linting from a comment #37: Issue comment #569 (comment) created by sateeshperi
1s
1s
Add rastair Fix linting from a comment #36: Issue comment #374 (comment) created by eduardcasas
1s
1s
Pixel distance in Picard mark duplicates Fix linting from a comment #35: Issue comment #526 (comment) created by sateeshperi
Skipped
Skipped
Add CX report support from bismark_methylation_extractor Fix linting from a comment #34: Issue comment #372 (comment) created by sateeshperi
Skipped
Skipped
--rrbs and --emseq parameter and argument usage Fix linting from a comment #33: Issue comment #389 (comment) created by sateeshperi
1s
1s
Added TAPS to methylseq Fix linting from a comment #32: Issue comment #565 (comment) created by eduard-watchmaker
1s
1s
Test run for parabricks bwameth fails Fix linting from a comment #31: Issue comment #564 (comment) created by bounlu
1s
1s
Test run for parabricks bwameth fails Fix linting from a comment #30: Issue comment #564 (comment) created by sateeshperi
1s
1s
AWS Access Key Id Fix linting from a comment #29: Issue comment #563 (comment) created by mbeavitt
1s
1s
Update bismark to 0.25.0 Fix linting from a comment #28: Issue comment #559 (comment) created by SPPearce
1s
1s
Hs metrics Fix linting from a comment #27: Issue comment #313 (comment) created by sateeshperi
1s
1s
Update bismark to 0.25.0 Fix linting from a comment #26: Issue comment #559 (comment) created by sateeshperi
1s
1s
bwa-mem2 is not installed in the bwameth container Fix linting from a comment #25: Issue comment #550 (comment) created by mbeavitt
2s
2s
Specify additional "genomes" of spike-in controls for downstream calculation of bisulfite conversion efficiency Fix linting from a comment #24: Issue comment #394 (comment) created by cjfields
1s
1s
Specify additional "genomes" of spike-in controls for downstream calculation of bisulfite conversion efficiency Fix linting from a comment #23: Issue comment #394 (comment) created by mpiersonsmela
1s
1s
bwa-mem2 is not installed in the bwameth container Fix linting from a comment #22: Issue comment #550 (comment) created by mbeavitt
2s
2s
bwa-mem2 is not installed in the bwameth container Fix linting from a comment #21: Issue comment #550 (comment) created by sateeshperi
1s
1s
fix bismark_hisat test_full run Fix linting from a comment #20: Issue comment #500 (comment) created by sateeshperi
1s
1s
bwa-mem2 is not installed in the bwameth container Fix linting from a comment #19: Issue comment #550 (comment) created by sateeshperi
1s
1s
Add FastQC to MultiQC just once Fix linting from a comment #18: Issue comment #548 (comment) created by sateeshperi
1s
1s
Container image version bump for bwameth Fix linting from a comment #17: Issue comment #552 (comment) created by sateeshperi
1s
1s
modules update + minor bug fix + doc link fix Fix linting from a comment #16: Issue comment #554 (comment) created by sateeshperi
1s
1s
Fix linting from a comment Fix linting from a comment #15: created by sateeshperi
1s
1s