Skip to content

Conversation

@dialvarezs
Copy link
Contributor

PR checklist

Closes #XXX

  • This comment contains a description of changes (with reason).
  • If you've fixed a bug or added code that should be tested, add tests!
  • If you've added a new tool - have you followed the module conventions in the contribution docs
  • If necessary, include test data in your PR.
  • Remove all TODO statements.
  • Emit the versions.yml file.
  • Follow the naming conventions.
  • Follow the parameters requirements.
  • Follow the input/output options guidelines.
  • Add a resource label
  • Use BioConda and BioContainers if possible to fulfil software requirements.
  • Ensure that the test works with either Docker / Singularity. Conda CI tests can be quite flaky:
    • For modules:
      • nf-core modules test <MODULE> --profile docker
      • nf-core modules test <MODULE> --profile singularity
      • nf-core modules test <MODULE> --profile conda
    • For subworkflows:
      • nf-core subworkflows test <SUBWORKFLOW> --profile docker
      • nf-core subworkflows test <SUBWORKFLOW> --profile singularity
      • nf-core subworkflows test <SUBWORKFLOW> --profile conda

@dialvarezs dialvarezs changed the title Update mmseq modules to v18 Update mmseqs modules to v18 Nov 1, 2025
@SPPearce SPPearce enabled auto-merge November 1, 2025 20:56
@SPPearce SPPearce added this pull request to the merge queue Nov 1, 2025
Merged via the queue into nf-core:master with commit 38697a9 Nov 1, 2025
72 checks passed
@dialvarezs dialvarezs deleted the update-mmseqs2 branch November 1, 2025 21:12
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Labels

None yet

Projects

None yet

Development

Successfully merging this pull request may close these issues.

2 participants