Amsterdam UMC Hematology Department

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7 repositories

cMRD-review
Public
Simulated example of computational measurable residual disease detection in acute myeloid leukemia.
machine-learning artificial-intelligence flow-cytometry cytometry acute-myeloid-leukemia
Jupyter Notebook
•0•0•0•0•Updated Jun 23, 2025Jun 23, 2025
MSGMM
Public
The multi-sample Gaussian mixture model (MSGMM) is a clustering model adapted to fitting multiple samples simultaneously using the EM algorithm.
clustering expectation-maximization gaussian-mixture-models unsupervised-learning gmm mixture-model flow-cytometry mass-cytometry cytometry unsupervised-clustering
R
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Other
•0•0•0•0•Updated Jun 17, 2025Jun 17, 2025
SCD-PBMC-manuscript
Public
In-depth immunoprofiling of sickle cell disease (SCD) patients by computational flow cytometry analysis.
flow-cytometry unsupervised-clustering sickle-cell immunophenotyping
0•0•0•0•Updated Apr 17, 2025Apr 17, 2025
.github
Public
1•0•0•1•Updated Mar 12, 2025Mar 12, 2025
CytoTools
Public
A small R package containing useful R functions for cytometry data for internal use.
flow-cytometry-analysis flow-cytometry
R
•0•1•0•0•Updated Sep 23, 2024Sep 23, 2024
cMRD-manuscript
Public
Code used for computational detection of MRD in AML using flow cytometry data.
machine-learning algorithm flow-cytometry-analysis flow-cytometry acute-myeloid-leukemia
Jupyter Notebook
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Other
•0•1•0•0•Updated Jul 16, 2024Jul 16, 2024
imputation-manuscript
Public
This repository contains the code used in our benchmark of imputation tools for flow cytometry data.
imputation flow-cytometry-analysis flow-cytometry
Jupyter Notebook
•0•1•0•0•Updated Jun 26, 2023Jun 26, 2023