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@msysbio Lab of microbial systems biology

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    8 repositories

    • PlasticDaphnia-ISMEJ

      Public
      Effects of microplastics on Daphnia-associated microbiomes in situ and in vitro
      HTML
      •0•0•0•0•Updated Oct 29, 2024Oct 29, 2024

    • microbetagApp-public

      Public
      microbetag web service
      Python
      •0•1•6•0•Updated Aug 13, 2024Aug 13, 2024

    • bacterial_growth

      Public
      a database and an interface for bacterial growth data
      pythonsqlgrowth-curvesbacterial-database
      Python
      •3•1•9•0•Updated Jul 10, 2024Jul 10, 2024

    • PlasticEnzSearch

      Public
      Python
      •0•0•1•0•Updated May 31, 2024May 31, 2024

    • BTRI_mucin_study_data

      Public
      Processed RNA-seq and fermentation data for "Starvation response strategies of human gut bacteria Bacteroides thetaiotaomicron and Roseburia intestinalis and their impact on co-culture dynamics".
      0•0•0•0•Updated Feb 13, 2024Feb 13, 2024

    • BTRI_mucin_study_scripts

      Public
      Scripts for "Starvation response strategies of human gut bacteria Bacteroides thetaiotaomicron and Roseburia intestinalis and their impact on co-culture dynamics".
      MATLAB
      •0•0•0•0•Updated Feb 17, 2023Feb 17, 2023

    • .github

      Public
      msysbio-welcome
      0•2•0•0•Updated Dec 20, 2022Dec 20, 2022

    • GutMicrobes2022

      Public
      Supplementary Material for van de Velde et al. Gut Microbes 2022
      R
      •0•0•0•0•Updated Dec 20, 2022Dec 20, 2022