Repositories list

• openUC2.github.io

  Public
  Wiki pages for the openUC2 system based on Docusaurus

  HTML

  •

  MIT License

  •5•0•1•0•Updated Jul 10, 2025Jul 10, 2025

• ImSwitch

  Public
  ImSwitch is a software solution in Python that aims at generalizing microscope control by providing a solution for flexible control of multiple microscope modalities.

  Python

  •

  GNU General Public License v3.0

  •55•12•9•2•Updated Jul 10, 2025Jul 10, 2025

• ImSwitch-ReactAPP

  Public
  This is an attempt to have a React frontend for the webrtc-based control of imswitch

  JavaScript

  •0•1•5•2•Updated Jul 9, 2025Jul 9, 2025

• UC2-REST

  Public
  UC2 code for using the REST API with electronic modules (LED, motors, etc.)

  Jupyter Notebook

  •

  Other

  •3•9•2•0•Updated Jul 8, 2025Jul 8, 2025

• TechnicalDocs-openUC2-HoloBox

  Public
  This is the holographic box for openUC2

  Jupyter Notebook

  •0•0•8•2•Updated Jul 7, 2025Jul 7, 2025

• ImSwitchConfig

  Public
  Jupyter Notebook

  •2•4•5•1•Updated Jul 6, 2025Jul 6, 2025

• ImSwitchInstaller

  Public
  An installer for ImSwitch based on Electron

  Python

  •

  MIT License

  •0•0•0•0•Updated Jul 6, 2025Jul 6, 2025

• ImSTORM

  Public
  Arkitekt Service to reconstruct frames using microEye

  Python

  •1•0•0•0•Updated Jul 5, 2025Jul 5, 2025

• microEyeUC2

  Public
  A python toolkit for fluorescence microscopy.

  Python

  •

  GNU General Public License v3.0

  •7•0•0•0•Updated Jul 5, 2025Jul 5, 2025

• imswitch-os

  Public template
  ImSwitch OS images with Forklift integration layered over Raspberry Pi OS

  dockerosforklift+ 1imswitch

  Shell

  •

  Apache License 2.0

  •2•0•0•1•Updated Jul 2, 2025Jul 2, 2025

• pallet

  Public
  This is the pallet repo for the forklift

  YAML

  •

  MIT License

  •1•0•1•0•Updated Jul 2, 2025Jul 2, 2025

• ImSwitchInstaller_OLD

  Public
  An electron-based installer for ImSwitch

  Python

  •

  MIT License

  •2•0•10•0•Updated Jul 2, 2025Jul 2, 2025

• PyInventor

  Public
  A Python based Autodesk Inventor API module!

  Jupyter Notebook

  •

  MIT License

  •10•0•1•1•Updated Jun 27, 2025Jun 27, 2025

• openUC2-Hackathon-BluFocus

  Public
  Python

  •1•1•2•1•Updated Jun 19, 2025Jun 19, 2025

• ImSwitchDockerInstall

  Public
  This is the repository to install and launch ImSwitch in Docker

  Python

  •1•0•2•0•Updated Jun 18, 2025Jun 18, 2025

• ashlarUC2

  Public
  ASHLAR: Alignment by Simultaneous Harmonization of Layer/Adjacency Registration

  Python

  •

  MIT License

  •45•0•0•0•Updated Jun 18, 2025Jun 18, 2025

• openUC2-LaserScanner

  Public
  C

  •

  MIT License

  •20•0•0•0•Updated Jun 12, 2025Jun 12, 2025

• openUC2_MultiCam

  Public
  This is a programm to visuazile multiple webcams in linux

  Python

  •0•0•1•0•Updated Jun 5, 2025Jun 5, 2025

• UC2-GIT

  Public archive
  Respository for Open-Science modular microscope system.

  pythonraspberry-pidiy+ 3printing-3dincubatormicroscope

  Jupyter Notebook

  •

  Other

  •71•497•43•1•Updated May 22, 2025May 22, 2025

• mmCoreAndDevices

  Public
  Micro-Manager's device control layer, written in C++

  C++

  •117•0•0•0•Updated May 21, 2025May 21, 2025

• openUc2MicroManagerDeviceAdapter

  Public
  This is an attempt to use the openUC2 board inside micromanager

  C++

  •0•0•1•0•Updated May 21, 2025May 21, 2025

• openUC2_esptool_docker

  Public
  This is an application that can flash the latest firmware from youseetoo.github.io inside docker

  Shell

  •0•0•0•0•Updated May 16, 2025May 16, 2025

• imswitch-arkitekt-next

  Public
  Plugin to implement Arkitekt-Next as a standalone Client

  Python

  •

  MIT License

  •2•0•1•1•Updated May 15, 2025May 15, 2025

• micro-manager

  Public
  Microscope control and image acquisition integrated with ImageJ

  Java

  •241•0•0•0•Updated May 15, 2025May 15, 2025

• imswitch-lightsheet

  Public
  Python

  •

  MIT License

  •0•0•0•0•Updated May 15, 2025May 15, 2025

• imswitch_lightsheet

  Public
  An ImSwitch Plugin that hosts react ui elements

  Python

  •0•1•0•0•Updated May 10, 2025May 10, 2025

• imswitchclient

  Public
  This is a REST Client for the ImSwitch Fastapi

  Jupyter Notebook

  •

  MIT License

  •0•1•1•0•Updated May 9, 2025May 9, 2025

• openUC2-SEEED-XIAO-Camera

  Public
  An openUC2 module for the Seeed Xiao Camera module

  1•0•0•0•Updated May 7, 2025May 7, 2025

• openuc2-dorna-control

  Public
  This is a repository for the dorna ai robot that can feed a microscope with samples

  Python

  •0•1•0•0•Updated May 4, 2025May 4, 2025

• Arkitektrons

  Public
  An Interface for the opentrons to talk to Arkitekt as a service.

  Python

  •2•0•0•0•Updated Apr 15, 2025Apr 15, 2025