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    • library

      Public
      A website for sharing QIIME 2 Plugins
      Svelte
      1031Updated Jul 24, 2025Jul 24, 2025
    • Python
      27660Updated Jul 23, 2025Jul 23, 2025
    • Makefile
      7375Updated Jul 23, 2025Jul 23, 2025
    • qiime2

      Public
      Source for the QIIME 2 Framework (Q2F).
      Python
      251508658Updated Jul 22, 2025Jul 22, 2025
    • q2-types

      Public
      Python
      4217261Updated Jul 22, 2025Jul 22, 2025
    • q2-stats

      Public
      Python
      9141Updated Jul 22, 2025Jul 22, 2025
    • QIIME 2 plugin for machine learning prediction of sample data.
      Python
      346151Updated Jul 22, 2025Jul 22, 2025
    • A QIIME 2 plugin for quality control of sequence and feature data
      Python
      17471Updated Jul 22, 2025Jul 22, 2025
    • QIIME 2 plugin for paired sample comparisons
      Python
      179282Updated Jul 22, 2025Jul 22, 2025
    • QIIME 2 plugin supporting taxonomic classification
      Python
      401991Updated Jul 22, 2025Jul 22, 2025
    • Python
      21141Updated Jul 22, 2025Jul 22, 2025
    • q2-demux

      Public
      Python
      221103Updated Jul 22, 2025Jul 22, 2025
    • q2-deblur

      Public
      Python
      21272Updated Jul 22, 2025Jul 22, 2025
    • q2-dada2

      Public
      QIIME 2 plugin wrapping DADA2
      Python
      3721112Updated Jul 22, 2025Jul 22, 2025
    • Python
      17331Updated Jul 22, 2025Jul 22, 2025
    • q2view

      Public
      A web-based "serverless" viewer of QIIME 2 Artifacts and Visualizations
      TypeScript
      2122Updated Jul 21, 2025Jul 21, 2025
    • Source for QIIME 2 amplicon documentation.
      Makefile
      0160Updated Jul 21, 2025Jul 21, 2025
    • Moving Pictures Tutorial source
      Makefile
      0000Updated Jul 18, 2025Jul 18, 2025
    • q2doc

      Public
      A MyST executable plugin for documenting QIIME 2 plugins.
      Python
      1040Updated Jul 16, 2025Jul 16, 2025
    • Stores a list of the repos that are included in the QIIME 2 library
      6002Updated Jul 15, 2025Jul 15, 2025
    • homepage

      Public
      QIIME 2 Homepage
      Astro
      0000Updated Jul 15, 2025Jul 15, 2025
    • Official QIIME 2 tools for Galaxy
      Python
      51103Updated Jul 15, 2025Jul 15, 2025
    • Python
      453451Updated Jul 14, 2025Jul 14, 2025
    • q2cli

      Public
      Command line interface for QIIME 2
      Python
      2619110Updated Jul 14, 2025Jul 14, 2025
    • Python
      1713120Updated Jul 14, 2025Jul 14, 2025
    • Python
      5000Updated Jul 10, 2025Jul 10, 2025
    • q2-taxa

      Public
      Python
      293430Updated Jul 9, 2025Jul 9, 2025
    • Quality filtering for QIIME2
      Python
      15130Updated Jul 9, 2025Jul 9, 2025
    • vsearch plugin for QIIME 2
      Python
      21680Updated Jul 9, 2025Jul 9, 2025
    • Python
      1110Updated Jul 9, 2025Jul 9, 2025