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    139 repositories

    • event-pdf

      Public
      Generates the Reactome book
      Java
      •
      GNU Affero General Public License v3.0
      •1•1•0•1•Updated Dec 9, 2025Dec 9, 2025

    • Website

      Public
      Contains the code and configuration for the website
      PHP
      •
      GNU General Public License v2.0
      •2•5•1•0•Updated Dec 9, 2025Dec 9, 2025

    • curator-tool-frontend

      Public
      TypeScript
      •0•0•0•0•Updated Dec 8, 2025Dec 8, 2025

    • release-verifier-lib

      Public
      A library of common functions for verifying release steps have run successfully
      Java
      •0•0•0•0•Updated Dec 8, 2025Dec 8, 2025

    • data-content

      Public
      Java
      •2•1•0•0•Updated Dec 5, 2025Dec 5, 2025

    • icon-validator

      Public
      Validate the structure and values of icon files
      Java
      •1•0•0•2•Updated Dec 5, 2025Dec 5, 2025

    • release-download-directory

      Public
      Data-release-pipeline: Generation of files for the Reactome website download directory
      releasedata-release-pipelinemysql-release
      Java
      •1•0•10•0•Updated Dec 5, 2025Dec 5, 2025

    • Pathway-Exchange

      Public
      Pathway Exchange Code Repository
      Java
      •1•0•2•0•Updated Dec 4, 2025Dec 4, 2025

    • release-gtp2chebi-update

      Public
      This project creates ChEBI cross-references in ReferenceTherapeutic instances by mapping from Guide to Pharmacology to ChEBI identifiers
      Java
      •
      Apache License 2.0
      •0•0•0•0•Updated Dec 3, 2025Dec 3, 2025

    • release-orthoinference

      Public
      Data-release-pipeline: Orthology projection of human reactions and pathways to non-human species
      releasedata-release-pipelinemysql-release
      Java
      •0•0•0•3•Updated Dec 3, 2025Dec 3, 2025

    • PathwayBrowser

      Public
      TypeScript
      •0•0•19•0•Updated Dec 3, 2025Dec 3, 2025

    • gsa-frontend

      Public
      TypeScript
      •
      Apache License 2.0
      •1•1•5•0•Updated Dec 3, 2025Dec 3, 2025

    • gsa-backend

      Public
      Backend code of the Kubernetes based ReactomeGSA Analysis System
      Python
      •1•4•17•1•Updated Dec 3, 2025Dec 3, 2025

    • release-jenkins-utils

      Public
      Data-release-pipeline: Utilities repository that contains files for initializing Release via Jenkins and general-use scripts used in Release
      releasedata-release-pipeline
      Groovy
      •
      Apache License 2.0
      •1•0•5•0•Updated Dec 1, 2025Dec 1, 2025

    • diagram-exporter

      Public
      Exporter of the diagram layout to different formats (pptx, svg, png, gif, jpg, sbgn)
      Java
      •3•1•2•2•Updated Nov 30, 2025Nov 30, 2025

    • search-indexer

      Public
      Java
      •3•0•0•2•Updated Nov 28, 2025Nov 28, 2025

    • CuratorTool

      Public
      The Reactome Java API for the relational database and the Curator Tool
      Java
      •7•3•11•5•Updated Nov 26, 2025Nov 26, 2025

    • sbml-exporter

      Public
      Java
      •1•0•0•0•Updated Nov 25, 2025Nov 25, 2025

    • data-export

      Public
      Creates the files to be placed in the download section
      Java
      •2•2•2•2•Updated Nov 25, 2025Nov 25, 2025

    • release-biomodels

      Public
      Data-release-pipeline: Insertion of BioModels identifiers cross-references (data generated by https://github.com/reactome/biomodels-mapper) for Pathway instances
      releasedata-release-pipelinemysql-release
      Java
      •1•0•2•0•Updated Nov 24, 2025Nov 24, 2025

    • diagram-converter

      Public
      Generates a set of JSON files to be consumed by the Diagram Viewer
      Java
      •3•1•0•0•Updated Nov 24, 2025Nov 24, 2025

    • reactome_nginx

      Public
      This is for depoying all of the reactome production services
      Shell
      •
      Apache License 2.0
      •0•0•0•0•Updated Nov 24, 2025Nov 24, 2025

    • reactome_chatbot

      Public
      This is Reactomes chatbot to its database and search index
      Python
      •
      Apache License 2.0
      •0•4•2•2•Updated Nov 22, 2025Nov 22, 2025

    • graph-add-links

      Public
      This project is responsible for adding third-party reference database links to the Reactome graph database
      Java
      •0•0•0•1•Updated Nov 20, 2025Nov 20, 2025

    • release-ortho-stable-id-history

      Public
      Java
      •0•0•0•0•Updated Nov 17, 2025Nov 17, 2025

    • popularpathways

      Public
      Java
      •0•0•0•0•Updated Nov 14, 2025Nov 14, 2025

    • disease-digester

      Public
      To represent the disease-gene binary relationship with a REACTOME overlay
      JavaScript
      •1•1•0•1•Updated Nov 14, 2025Nov 14, 2025

    • report-logger

      Public
      Centralises different events across various services for periodic report
      Java
      •0•1•0•0•Updated Nov 14, 2025Nov 14, 2025

    • experiment-digester

      Public
      Java
      •0•0•0•0•Updated Nov 14, 2025Nov 14, 2025

    • interaction-exporter

      Public
      Exports molecular interactions inferred from Reactome content
      Java
      •1•5•0•1•Updated Nov 14, 2025Nov 14, 2025