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Reactome

A curated pathway database

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  1. reactome2py reactome2py Public

    python client for reactome content, analysis, and human functional protein interactions (FI) services api calls.

    Python 28 9

  2. ReactomeGSA ReactomeGSA Public

    R client for the REACTOME Analysis Service for comparative multi-omics gene set analysis

    R 22 4

  3. graph-core graph-core Public

    Models the Reactome knowledgebase into a interconnected graph

    Java 17 7

  4. pwp-browser pwp-browser Public

    A tool for visualising and interacting with pathways data

    Java 10 7

  5. container container Public

    🚧 Repository for files for running a Reactome production-like environment inside a docker container. Currently, this project's status is "Work-In-Progress". 🚧

    Perl 9 4

  6. content-service content-service Public

    The new Reactome REST API to access the data

    Java 9 5

Repositories

Showing 10 of 128 repositories
  • data-export Public

    Creates the files to be placed in the download section

    reactome/data-export’s past year of commit activity
    Java 2 2 2 1 Updated Jan 29, 2025
  • reactome_chatbot Public

    This is Reactomes chatbot to its database and search index

    reactome/reactome_chatbot’s past year of commit activity
    Python 1 Apache-2.0 0 0 0 Updated Jan 29, 2025
  • event-pdf Public

    Generates the Reactome book

    reactome/event-pdf’s past year of commit activity
    Java 1 AGPL-3.0 1 0 0 Updated Jan 29, 2025
  • reactome/PathwayBrowser’s past year of commit activity
    TypeScript 0 0 0 0 Updated Jan 29, 2025
  • pwp-analytics Public

    Google Analytics

    reactome/pwp-analytics’s past year of commit activity
    Java 0 0 0 0 Updated Jan 29, 2025
  • pwp-gxa Public

    GWT wrapper for the Gene Expression Atlas widget

    reactome/pwp-gxa’s past year of commit activity
    Java 0 0 0 1 Updated Jan 29, 2025
  • analysis-core Public

    Pathway enrichment and expression analysis as well as species comparison tool

    reactome/analysis-core’s past year of commit activity
    Java 3 6 1 0 Updated Jan 29, 2025
  • pwp-carrousel Public
    reactome/pwp-carrousel’s past year of commit activity
    Java 0 1 0 1 Updated Jan 29, 2025
  • sbml-exporter Public
    reactome/sbml-exporter’s past year of commit activity
    Java 0 1 0 0 Updated Jan 28, 2025
  • release-verifier-lib Public

    A library of common functions for verifying release steps have run successfully

    reactome/release-verifier-lib’s past year of commit activity
    Java 0 0 0 0 Updated Jan 28, 2025