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pr-pdfs-close.yaml
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Document the ambiguity of 1-base long seq with QUAL * Tidy up PDF pull request #48: Pull request #724 closed by jmarshall
July 15, 2025 20:07 6s
July 15, 2025 20:07 6s
Clarify ambiguity in ITF-8 format Tidy up PDF pull request #47: Pull request #831 closed by jkbonfield
June 17, 2025 14:24 11s
June 17, 2025 14:24 11s
Rework the CRAM bit encoding example and clarify text Tidy up PDF pull request #46: Pull request #820 closed by jkbonfield
April 15, 2025 14:44 6s
April 15, 2025 14:44 6s
Fix CRAM record counter to be 0 based. Tidy up PDF pull request #45: Pull request #822 closed by jkbonfield
April 7, 2025 14:44 7s
April 7, 2025 14:44 7s
Fix the rANS 4x8 order-1 frequency encoding example. Tidy up PDF pull request #44: Pull request #819 closed by jkbonfield
April 7, 2025 14:39 6s
April 7, 2025 14:39 6s
Document CRAM NP and AP (non-delta) as 1-based coordinates. Tidy up PDF pull request #43: Pull request #821 closed by jkbonfield
April 7, 2025 13:59 6s
April 7, 2025 13:59 6s
Clarify the name tokeniser uncomp_len calculation (PR #803) Tidy up PDF pull request #42: Pull request #803 closed by jkbonfield
March 24, 2025 15:47 7s
March 24, 2025 15:47 7s
SAM: add a sentence on case-insensitivity of RG PL (PR #684) Tidy up PDF pull request #41: Pull request #684 closed by jmarshall
November 5, 2024 16:17 12s
November 5, 2024 16:17 12s
Recommend 1bp SEQ with QUAL="*" as quality-unavailable. Tidy up PDF pull request #40: Pull request #752 closed by jmarshall
November 5, 2024 15:36 15s
November 5, 2024 15:36 15s
Add subtitles noting VCFv4.[1-4].pdf have been superseded by later versions Tidy up PDF pull request #39: Pull request #782 closed by d-cameron
October 8, 2024 20:34 14s
October 8, 2024 20:34 14s
Set off example tabular environment with the usual spacing [formatting] Tidy up PDF pull request #38: Pull request #794 closed by d-cameron
October 8, 2024 20:10 13s
October 8, 2024 20:10 13s
Test updated actions Tidy up PDF pull request #37: Pull request #795 closed by jmarshall
October 1, 2024 09:00 12s
October 1, 2024 09:00 12s
Add an MN:i tag (number of SEQ bases at time of modification tag update). Tidy up PDF pull request #36: Pull request #714 closed by jkbonfield
September 9, 2024 08:37 9s
September 9, 2024 08:37 9s
Fix CRAM pseudocode for handling BAM mapped flag (PR #788) Tidy up PDF pull request #35: Pull request #788 closed by jkbonfield
September 4, 2024 10:27 12s
September 4, 2024 10:27 12s
Revert defn of CRAM container size to be sum of block sizes (PR#731) Tidy up PDF pull request #34: Pull request #731 closed by jkbonfield
August 6, 2024 15:08 15s
August 6, 2024 15:08 15s