- rust pangenome graph summarize.
- it writes the pangenome graph fasta also.
- Incase of Golang and RUST, please see the last commit message and if it says compiled binary then it is completed or else still in development version.
cargo build
╭─gauravsablok@fedora ~/Desktop/rust-pangenome-graph-summarize ‹main*›
╰─➤ ./target/debug/rust-pangenome-graph-summarize -h
Usage: rust-pangenome-graph-summarize <GRAPH>
Arguments:
<GRAPH> please provide the path to the graph file
Options:
-h, --help Print help
-V, --version Print version
╭─gauravsablok@fedora ~/Desktop/rust-pangenome-graph-summarize ‹main*›
╰─➤ ./rust-pangenome-graph-summarize ./sample-file/sample-pangenome.gfa
Results have been written:
number_segment:8
number_links:11
number_arc:22
number_rank:2
total_segment_length:17572
average_segment_length:2196
sum_0_segment_length:16569
Gaurav Sablok