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Currently sleap-nn-train does not take commandline overrides because of a bug with how hydra handles overrides, this PR solves it.

@tom21100227 tom21100227 self-assigned this Aug 21, 2025
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codecov bot commented Aug 21, 2025

Codecov Report

✅ All modified and coverable lines are covered by tests.
✅ Project coverage is 95.39%. Comparing base (ff91433) to head (51cec07).
⚠️ Report is 19 commits behind head on main.

Additional details and impacted files
@@            Coverage Diff             @@
##             main     #303      +/-   ##
==========================================
+ Coverage   95.28%   95.39%   +0.10%     
==========================================
  Files          49       49              
  Lines        6765     6990     +225     
==========================================
+ Hits         6446     6668     +222     
- Misses        319      322       +3     

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@tom21100227 tom21100227 marked this pull request as ready for review August 21, 2025 18:05
@tom21100227
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thank you CI tools for sparing my PR

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This would also close #301 and added test to prevent new additions from breaking it again.

@tom21100227 tom21100227 linked an issue Aug 21, 2025 that may be closed by this pull request
@gitttt-1234 gitttt-1234 merged commit fef5b64 into talmolab:main Aug 21, 2025
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Hydra overrides doesn't work with sleap-nn-train

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