A Julia package to analyze protein sequences, structures, and evolutionary information

Molecular convergence detection

phylogenetic analyses informed by deep mutational scanning data

Use Thor's Axe to cut exons into their evolutionary building blocks ⚡

A tool to model the evolution and structural impact of alternative splicing

Learning the language of phylogeny with MSA Transformer

Exploring evolutionary protein fitness landscapes

Automated pipeline for downloading, cleaning, and analyzing mainly alpha-helix protein structures from the CATH database.

Code-base for my ABC-selectivity paper in Current Biology

Phylogenetic tree of LAR and other PIP family enzymes as shown in Güngör et al. 2020. This repository details all code and intermediate files used.

Code and Data for Research Article

Phylogeny and classification of Azolla filiculoides MYB genes