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cdskit rmseq

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Kenji Fukushima edited this page Mar 6, 2023 · 2 revisions

cdskit rmseq removes a subset of sequences by using a sequence name regex and by detecting problematic sequence characters.

Example command

rmseq -s input.fasta --seqname Arabidopsis_thaliana.* --problematic_percent 50 -o out.fasta

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